Difference between revisions of "RXN-16113"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTCYCLOHYD-RXN HISTCYCLOHYD-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme....")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16113 RXN-16113] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTCYCLOHYD-RXN HISTCYCLOHYD-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16113 RXN-16113] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.5.4.19 EC-3.5.4.19]
+
** [http://enzyme.expasy.org/EC/4.2.1.134 EC-4.2.1.134]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PHOSPHORIBOSYL-AMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PHOSPHORIBOSYL-FORMIMINO-AICAR-P]][c]
+
** 1 [[CPD-17367]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[CPD-17368]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 1-(5-phospho-β-D-ribosyl)-AMP[c] '''+''' 1 H2O[c] '''=>''' 1 1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide[c]
+
** 1 (3R)-hydroxy-adrenoyl-CoA[c] '''=>''' 1 H2O[c] '''+''' 1 trans-adre-2-enoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Ec-19_001690]]
 
−
** [[pantograph]]-[[aragem]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
+
* [[PWY-7728]], (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis II (4-desaturase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7728 PWY-7728]
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7726]], (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7726 PWY-7726]
 +
** '''13''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[aragem]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20049 20049]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04037 R04037]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P44434 P44434]
 
−
** [http://www.uniprot.org/uniprot/Q9JVH6 Q9JVH6]
 
−
** [http://www.uniprot.org/uniprot/Q9X0C5 Q9X0C5]
 
−
** [http://www.uniprot.org/uniprot/Q9PM71 Q9PM71]
 
−
** [http://www.uniprot.org/uniprot/Q02130 Q02130]
 
−
** [http://www.uniprot.org/uniprot/Q9RWD6 Q9RWD6]
 
−
** [http://www.uniprot.org/uniprot/Q58825 Q58825]
 
−
** [http://www.uniprot.org/uniprot/O28329 O28329]
 
−
** [http://www.uniprot.org/uniprot/O34912 O34912]
 
−
** [http://www.uniprot.org/uniprot/P0A5B3 P0A5B3]
 
−
** [http://www.uniprot.org/uniprot/Q9HUB7 Q9HUB7]
 
−
** [http://www.uniprot.org/uniprot/Q9KSW7 Q9KSW7]
 
−
** [http://www.uniprot.org/uniprot/Q9K0H5 Q9K0H5]
 
−
** [http://www.uniprot.org/uniprot/O67780 O67780]
 
−
** [http://www.uniprot.org/uniprot/Q9PBD1 Q9PBD1]
 
−
** [http://www.uniprot.org/uniprot/Q50837 Q50837]
 
−
** [http://www.uniprot.org/uniprot/Q53158 Q53158]
 
−
** [http://www.uniprot.org/uniprot/P45353 P45353]
 
−
** [http://www.uniprot.org/uniprot/Q12670 Q12670]
 
−
** [http://www.uniprot.org/uniprot/P00815 P00815]
 
−
** [http://www.uniprot.org/uniprot/P07685 P07685]
 
−
** [http://www.uniprot.org/uniprot/O59667 O59667]
 
−
** [http://www.uniprot.org/uniprot/Q9X7C3 Q9X7C3]
 
−
** [http://www.uniprot.org/uniprot/O82768 O82768]
 
−
** [http://www.uniprot.org/uniprot/P10367 P10367]
 
−
** [http://www.uniprot.org/uniprot/P06989 P06989]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-3.5.4.19}}
+
{{#set: ec number=EC-4.2.1.134}}
−
{{#set: gene associated=Ec-19_001690}}
+
{{#set: in pathway=PWY-7728|PWY-7726}}
−
{{#set: in pathway=HISTSYN-PWY}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=aragem}}
+

Latest revision as of 19:12, 21 March 2018

Reaction RXN-16113

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (3R)-hydroxy-adrenoyl-CoA[c] => 1 H2O[c] + 1 trans-adre-2-enoyl-CoA[c]

Genes associated with this reaction

Pathways

  • PWY-7728, (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis II (4-desaturase): PWY-7728
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7726, (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): PWY-7726
    • 13 reactions found over 13 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-16113&oldid=25286"