Difference between revisions of "RXN-16113"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7342 PWY-7342] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4070 TAX-40...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16113 RXN-16113] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7342 PWY-7342] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16113 RXN-16113] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4070 TAX-4070]
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** LEFT-TO-RIGHT
* common name:
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* ec number:
** superpathway of nicotine biosynthesis
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** [http://enzyme.expasy.org/EC/4.2.1.134 EC-4.2.1.134]
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reaction Formula ==
'''4''' reactions found over '''13''' reactions in the full pathway
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* With identifiers:
* [[L-ASPARTATE-OXID-RXN]]
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** 1 [[CPD-17367]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[CPD-17368]][c]
** 1 associated gene(s):
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* With common name(s):
*** [[Ec-05_003640]]
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** 1 (3R)-hydroxy-adrenoyl-CoA[c] '''=>''' 1 H2O[c] '''+''' 1 trans-adre-2-enoyl-CoA[c]
** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
* [[PWY-5316]]
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== Pathways  ==
** 0 associated gene:
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* [[PWY-7728]], (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis II (4-desaturase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7728 PWY-7728]
* [[QUINOLINATE-SYNTHA-RXN]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
** 1 associated gene(s):
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* [[PWY-7726]], (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7726 PWY-7726]
*** [[Ec-25_002400]]
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** '''13''' reactions found over '''13''' reactions in the full pathway
** 1 reconstruction source(s) associated:
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== Reconstruction information  ==
*** [[annotation-esiliculosus_genome]]
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* Category: [[annotation]]
* [[QUINOPRIBOTRANS-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
** 3 associated gene(s):
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*** Tool: [[pathwaytools]]
*** [[Ec-27_002350]]
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*** [[Ec-09_003390]]
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*** [[Ec-05_000790]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-5315 PWY-5315]
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-5315 PWY-5315]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13057 RXN-13057]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13058 RXN-13058]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13059 RXN-13059]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13060 RXN-13060]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8248 RXN-8248]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8444 RXN-8444]
+
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-4070}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=superpathway of nicotine biosynthesis}}
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{{#set: ec number=EC-4.2.1.134}}
{{#set: reaction found=4}}
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{{#set: in pathway=PWY-7728|PWY-7726}}
{{#set: total reaction=13}}
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{{#set: reconstruction category=annotation}}
{{#set: completion rate=31.0}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:12, 21 March 2018

Reaction RXN-16113

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (3R)-hydroxy-adrenoyl-CoA[c] => 1 H2O[c] + 1 trans-adre-2-enoyl-CoA[c]

Genes associated with this reaction

Pathways

  • PWY-7728, (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis II (4-desaturase): PWY-7728
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7726, (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): PWY-7726
    • 13 reactions found over 13 reactions in the full pathway

Reconstruction information

External links