Difference between revisions of "Ec-01 012040"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16389 RXN-16389] == * direction: ** LEFT-TO-RIGHT * common name: ** long chain acyl-coA synthet...")
(Created page with "Category:Gene == Gene Ec-01_012040 == * left end position: ** 10033167 * transcription direction: ** NEGATIVE * right end position: ** 10037846 * centisome position: ** 97...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16389 RXN-16389] ==
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== Gene Ec-01_012040 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 10033167
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* common name:
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* transcription direction:
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** long chain acyl-coA synthetase
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** NEGATIVE
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** long chain acyl-CoA synthetase
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* right end position:
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* ec number:
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** 10037846
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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* centisome position:
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** 97.2316   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0008_0045
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** Esi0008_0045
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.1.3.16-RXN]]
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** 1 [[16-HYDROXYPALMITATE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CPD-17621]][c] '''+''' 1 [[AMP]][c]
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* With common name(s):
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** 1 16-hydroxypalmitate[c] '''+''' 1 coenzyme A[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 16-hydroxypalmitoyl-CoA[c] '''+''' 1 AMP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-12_008720]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-01_001560]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-02_006430]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-03_003710]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-321]], cutin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-321 PWY-321]
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** '''1''' reactions found over '''16''' reactions in the full pathway
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* [[PWY-6733]], sporopollenin precursors biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733]
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** '''4''' reactions found over '''18''' reactions in the full pathway
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* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
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** '''6''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=10033167}}
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{{#set: common name=long chain acyl-coA synthetase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=long chain acyl-CoA synthetase}}
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{{#set: right end position=10037846}}
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{{#set: ec number=EC-6.2.1.3}}
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{{#set: centisome position=97.2316    }}
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{{#set: gene associated=Ec-12_008720|Ec-01_001560|Ec-02_006430|Ec-03_003710}}
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{{#set: common name=Esi_0008_0045|Esi0008_0045}}
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{{#set: in pathway=PWY-321|PWY-6733|PWY-1121}}
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{{#set: reaction associated=3.1.3.16-RXN}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:12, 21 March 2018

Gene Ec-01_012040

  • left end position:
    • 10033167
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 10037846
  • centisome position:
    • 97.2316
  • Synonym(s):
    • Esi_0008_0045
    • Esi0008_0045

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-01_012040&oldid=25303"