Difference between revisions of "RXN-16130"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERLEU-RXN BRANCHED-CHAINAMINOTRANSFERLEU-RXN] == * direction: ** REVERSIBL...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16130 RXN-16130] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERLEU-RXN BRANCHED-CHAINAMINOTRANSFERLEU-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16130 RXN-16130] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
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** LEFT-TO-RIGHT
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* common name:
+
−
** branched-chain-amino-acid transaminase
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* ec number:
 
* ec number:
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** [http://enzyme.expasy.org/EC/2.6.1.6 EC-2.6.1.6]
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** [http://enzyme.expasy.org/EC/4.2.1.134 EC-4.2.1.134]
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** [http://enzyme.expasy.org/EC/2.6.1.42 EC-2.6.1.42]
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* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
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** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[LEU]][c] '''<=>''' 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[GLT]][c]
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** 1 [[CPD-17382]][c] '''=>''' 1 [[CPD-17383]][c] '''+''' 1 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
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** 1 2-oxoglutarate[c] '''+''' 1 L-leucine[c] '''<=>''' 1 4-methyl-2-oxopentanoate[c] '''+''' 1 L-glutamate[c]
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** 1 (3R)-hydroxy-tetracosapentaenoyl-CoA[c] '''=>''' 1 (2Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c] '''+''' 1 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
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* [[Ec-20_001390]]
 
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** ESILICULOSUS_GENOME
 
−
***GO-TERM
 
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* [[Ec-12_005530]]
 
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** ESILICULOSUS_GENOME
 
−
***GO-TERM
 
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* [[Ec-12_005560]]
 
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** ESILICULOSUS_GENOME
 
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***GO-TERM
 
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* [[Ec-12_005520]]
 
−
** ESILICULOSUS_GENOME
 
−
***GO-TERM
 
 
== Pathways  ==
 
== Pathways  ==
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* [[PWY-7767]], leucine degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7767 PWY-7767]
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* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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** '''14''' reactions found over '''14''' reactions in the full pathway
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* [[LEU-DEG2-PWY]], L-leucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY]
+
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
−
* [[LEUSYN-PWY]], L-leucine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=LEUSYN-PWY LEUSYN-PWY]
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−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-5076]], L-leucine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5076 PWY-5076]
+
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18321 18321]
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{{#set: ec number=EC-4.2.1.134}}
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* LIGAND-RXN:
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{{#set: in pathway=PWY-7606}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01090 R01090]
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−
* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q9PIM6 Q9PIM6]
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** [http://www.uniprot.org/uniprot/P38891 P38891]
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** [http://www.uniprot.org/uniprot/P47176 P47176]
+
−
** [http://www.uniprot.org/uniprot/O86505 O86505]
+
−
** [http://www.uniprot.org/uniprot/O14370 O14370]
+
−
** [http://www.uniprot.org/uniprot/O32954 O32954]
+
−
** [http://www.uniprot.org/uniprot/P0AB80 P0AB80]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=branched-chain-amino-acid transaminase}}
+
−
{{#set: ec number=EC-2.6.1.6}}
+
−
{{#set: ec number=EC-2.6.1.42}}
+
−
{{#set: gene associated=Ec-20_001390|Ec-12_005530|Ec-12_005560|Ec-12_005520}}
+
−
{{#set: in pathway=PWY-7767|LEU-DEG2-PWY|LEUSYN-PWY|PWY-5076}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:13, 21 March 2018

Reaction RXN-16130

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (3R)-hydroxy-tetracosapentaenoyl-CoA[c] => 1 (2Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c] + 1 H2O[c]

Genes associated with this reaction

Pathways

  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
    • 14 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-16130&oldid=25362"