Difference between revisions of "PWY-5025"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R223-RXN R223-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** octanoyl-CoA ligase ** long c...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5025 PWY-5025] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-12...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R223-RXN R223-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5025 PWY-5025] ==
* direction:
+
* taxonomic range:
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
 
* common name:
 
* common name:
** octanoyl-CoA ligase
+
** indole-3-acetate biosynthesis IV (bacteria)
** long chain acyl-coA synthetase
+
** long chain acyl-CoA synthetase
+
* ec number:
+
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** IAA biosynthesis IV (bacteria)
  
== Reaction Formula ==
+
== Reaction(s) found ==
* With identifiers:
+
'''1''' reactions found over '''2''' reactions in the full pathway
** 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CPD-195]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[CPD-196]][c]
+
* [[RXNN-404]]
* With common name(s):
+
** 2 associated gene(s):
** 1 coenzyme A[c] '''+''' 1 ATP[c] '''+''' 1 octanoate[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 octanoyl-CoA[c]
+
*** [[Ec-02_005910]]
 
+
*** [[Ec-06_009020]]
== Genes associated with this reaction  ==
+
** 1 reconstruction source(s) associated:
Genes have been associated with this reaction based on different elements listed below.
+
*** [[annotation-esiliculosus_genome]]
* [[Ec-03_003710]]
+
== Reaction(s) not found ==
** ESILICULOSUS_GENOME
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7567 RXN-7567]
***AUTOMATED-NAME-MATCH
+
* [[Ec-12_008720]]
+
** ESILICULOSUS_GENOME
+
***AUTOMATED-NAME-MATCH
+
* [[Ec-02_006430]]
+
** ESILICULOSUS_GENOME
+
***AUTOMATED-NAME-MATCH
+
* [[Ec-01_001560]]
+
** ESILICULOSUS_GENOME
+
***AUTOMATED-NAME-MATCH
+
== Pathways  ==
+
* [[PWY-6920]], 6-gingerol analog biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6920 PWY-6920]
+
** '''3''' reactions found over '''6''' reactions in the full pathway
+
* [[P221-PWY]], octane oxidation: [http://metacyc.org/META/NEW-IMAGE?object=P221-PWY P221-PWY]
+
** '''2''' reactions found over '''5''' reactions in the full pathway
+
== Reconstruction information  ==
+
* [[annotation]]:
+
** [[pathwaytools]]:
+
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: taxonomic range=TAX-1224}}
{{#set: common name=octanoyl-CoA ligase}}
+
{{#set: common name=indole-3-acetate biosynthesis IV (bacteria)}}
{{#set: common name=long chain acyl-coA synthetase}}
+
{{#set: common name=IAA biosynthesis IV (bacteria)}}
{{#set: common name=long chain acyl-CoA synthetase}}
+
{{#set: reaction found=1}}
{{#set: ec number=EC-6.2.1.3}}
+
{{#set: total reaction=2}}
{{#set: gene associated=Ec-03_003710|Ec-12_008720|Ec-02_006430|Ec-01_001560}}
+
{{#set: completion rate=50.0}}
{{#set: in pathway=PWY-6920|P221-PWY}}
+
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=esiliculosus_genome}}
+

Latest revision as of 19:13, 21 March 2018

Pathway PWY-5025

  • taxonomic range:
  • common name:
    • indole-3-acetate biosynthesis IV (bacteria)
  • Synonym(s):
    • IAA biosynthesis IV (bacteria)

Reaction(s) found

1 reactions found over 2 reactions in the full pathway

Reaction(s) not found

External links