Difference between revisions of "DIAMINOPIMEPIM-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5958 PWY-5958] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-16739 TAX-1...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIAMINOPIMEPIM-RXN DIAMINOPIMEPIM-RXN] == * direction: ** REVERSIBLE * common name: ** Diaminopimel...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5958 PWY-5958] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIAMINOPIMEPIM-RXN DIAMINOPIMEPIM-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-16739 TAX-16739]
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-23513 TAX-23513]
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* common name:
 
* common name:
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** acridone alkaloid biosynthesis
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** Diaminopimelate epimerase, DapF
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* ec number:
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** [http://enzyme.expasy.org/EC/5.1.1.7 EC-5.1.1.7]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''1''' reaction(s) found
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* With identifiers:
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** [[ANTHRANSYN-RXN]]
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** 1 [[LL-DIAMINOPIMELATE]][c] '''<=>''' 1 [[MESO-DIAMINOPIMELATE]][c]
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== Reaction(s) not found ==
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* With common name(s):
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* '''3''' reaction(s) not found
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** 1 L,L-diaminopimelate[c] '''<=>''' 1 meso-diaminopimelate[c]
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** [http://metacyc.org/META/NEW-IMAGE?object=ANTHRANILATE-N-METHYLTRANSFERASE-RXN ANTHRANILATE-N-METHYLTRANSFERASE-RXN]
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** [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.159-RXN 2.3.1.159-RXN]
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== Genes associated with this reaction ==
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-9504 RXN-9504]
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-06_009100]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DAPLYSINESYN-PWY DAPLYSINESYN-PWY]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-2941]], L-lysine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-16739}}
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* RHEA:
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{{#set: taxonomic range=TAX-23513}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15393 15393]
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{{#set: common name=acridone alkaloid biosynthesis}}
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* LIGAND-RXN:
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{{#set: reaction found=1}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02735 R02735]
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{{#set: reaction not found=3}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q9PMD8 Q9PMD8]
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** [http://www.uniprot.org/uniprot/Q9JV69 Q9JV69]
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** [http://www.uniprot.org/uniprot/P44859 P44859]
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** [http://www.uniprot.org/uniprot/Q58519 Q58519]
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** [http://www.uniprot.org/uniprot/P0A6K1 P0A6K1]
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** [http://www.uniprot.org/uniprot/Q51564 Q51564]
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** [http://www.uniprot.org/uniprot/P46814 P46814]
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** [http://www.uniprot.org/uniprot/O05322 O05322]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Diaminopimelate epimerase, DapF}}
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{{#set: ec number=EC-5.1.1.7}}
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{{#set: gene associated=Ec-06_009100}}
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{{#set: in pathway=PWY-5097|DAPLYSINESYN-PWY|PWY-2941}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:13, 21 March 2018

Reaction DIAMINOPIMEPIM-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Diaminopimelate epimerase, DapF
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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