Difference between revisions of "PROTOHEMEFERROCHELAT-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17784 RXN-17784] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-CoA dehydrogenase ** A...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROTOHEMEFERROCHELAT-RXN PROTOHEMEFERROCHELAT-RXN] == * direction: ** REVERSIBLE * common name: **...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17784 RXN-17784] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROTOHEMEFERROCHELAT-RXN PROTOHEMEFERROCHELAT-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** acyl-CoA dehydrogenase
+
** Ferrochelatase
−
** Acyl-CoA dehydrogenase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.8 EC-1.3.8]
+
** [http://enzyme.expasy.org/EC/4.99.1.1 EC-4.99.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-18346]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-19163]][c] '''+''' 1 [[ETF-Reduced]][c]
+
** 1 [[PROTOHEME]][c] '''+''' 2 [[PROTON]][c] '''<=>''' 1 [[FE+2]][c] '''+''' 1 [[PROTOPORPHYRIN_IX]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 cis-vaccenoyl-CoA[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 H+[c] '''=>''' 1 (2E,11Z)-octadecenoyl-CoA[c] '''+''' 1 a reduced electron-transfer flavoprotein[c]
+
** 1 ferroheme b[c] '''+''' 2 H+[c] '''<=>''' 1 Fe2+[c] '''+''' 1 protoporphyrin IX[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-16_004260]]
+
* Gene: [[Ec-01_005360]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
−
* Gene: [[Ec-03_003490]]
+
** Source: [[orthology-aragem]]
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: AUTOMATED-NAME-MATCH
+
−
* Gene: [[Ec-14_001600]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY0-1415]], superpathway of heme biosynthesis from uroporphyrinogen-III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1415 PWY0-1415]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[HEMESYN2-PWY]], heme biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=HEMESYN2-PWY HEMESYN2-PWY]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[HEME-BIOSYNTHESIS-II]], heme biosynthesis I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=acyl-CoA dehydrogenase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22584 22584]
−
{{#set: common name=Acyl-CoA dehydrogenase}}
+
* LIGAND-RXN:
−
{{#set: ec number=EC-1.3.8}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00310 R00310]
−
{{#set: gene associated=Ec-16_004260|Ec-03_003490|Ec-14_001600}}
+
* UNIPROT:
−
{{#set: in pathway=}}
+
** [http://www.uniprot.org/uniprot/P22830 P22830]
−
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/P22315 P22315]
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
** [http://www.uniprot.org/uniprot/P28602 P28602]
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/Q05338 Q05338]
 +
** [http://www.uniprot.org/uniprot/P42043 P42043]
 +
** [http://www.uniprot.org/uniprot/P23871 P23871]
 +
** [http://www.uniprot.org/uniprot/P32396 P32396]
 +
** [http://www.uniprot.org/uniprot/Q9CFB4 Q9CFB4]
 +
** [http://www.uniprot.org/uniprot/P56107 P56107]
 +
** [http://www.uniprot.org/uniprot/O67083 O67083]
 +
** [http://www.uniprot.org/uniprot/Q9PI08 Q9PI08]
 +
** [http://www.uniprot.org/uniprot/Q9JVA5 Q9JVA5]
 +
** [http://www.uniprot.org/uniprot/P22600 P22600]
 +
** [http://www.uniprot.org/uniprot/P43868 P43868]
 +
** [http://www.uniprot.org/uniprot/P16622 P16622]
 +
** [http://www.uniprot.org/uniprot/Q59735 Q59735]
 +
** [http://www.uniprot.org/uniprot/P43413 P43413]
 +
** [http://www.uniprot.org/uniprot/P54225 P54225]
 +
** [http://www.uniprot.org/uniprot/P42045 P42045]
 +
** [http://www.uniprot.org/uniprot/O64391 O64391]
 +
** [http://www.uniprot.org/uniprot/P42044 P42044]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Ferrochelatase}}
 +
{{#set: ec number=EC-4.99.1.1}}
 +
{{#set: gene associated=Ec-01_005360}}
 +
{{#set: in pathway=PWY0-1415|HEMESYN2-PWY|HEME-BIOSYNTHESIS-II}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:14, 21 March 2018

Reaction PROTOHEMEFERROCHELAT-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Ferrochelatase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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