Difference between revisions of "RXN-5781"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R223-RXN R223-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** octanoyl-CoA ligase ** long c...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5781 RXN-5781] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/2.7.8...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R223-RXN R223-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5781 RXN-5781] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* common name:
+
−
** octanoyl-CoA ligase
+
−
** long chain acyl-coA synthetase
+
−
** long chain acyl-CoA synthetase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
+
** [http://enzyme.expasy.org/EC/2.7.8.2 EC-2.7.8.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-195]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CPD-196]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[CDP-CHOLINE]][c] '''+''' 1 [[DIACYLGLYCEROL]][c] '''<=>''' 1 [[CMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PHOSPHATIDYLCHOLINE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 octanoate[c] '''+''' 1 ATP[c] '''+''' 1 coenzyme A[c] '''=>''' 1 AMP[c] '''+''' 1 octanoyl-CoA[c] '''+''' 1 diphosphate[c]
+
** 1 CDP-choline[c] '''+''' 1 a 1,2-diacyl-sn-glycerol[c] '''<=>''' 1 CMP[c] '''+''' 1 H+[c] '''+''' 1 a phosphatidylcholine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* Gene: [[Ec-02_006430]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: AUTOMATED-NAME-MATCH
 
−
* Gene: [[Ec-12_008720]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: AUTOMATED-NAME-MATCH
 
−
* Gene: [[Ec-03_003710]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: AUTOMATED-NAME-MATCH
 
−
* Gene: [[Ec-01_001560]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: AUTOMATED-NAME-MATCH
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6920]], 6-gingerol analog biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6920 PWY-6920]
+
* [[PWY4FS-2]], phosphatidylcholine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-2 PWY4FS-2]
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
−
* [[P221-PWY]], octane oxidation: [http://metacyc.org/META/NEW-IMAGE?object=P221-PWY P221-PWY]
+
 
** '''2''' reactions found over '''5''' reactions in the full pathway
 
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-3561]], choline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3561 PWY-3561]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6804]], diacylglycerol biosynthesis (PUFA enrichment in oilseed): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6804 PWY-6804]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7367]], phosphatidylcholine resynthesis via glycerophosphocholine: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7367 PWY-7367]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY3O-450]], phosphatidylcholine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-450 PWY3O-450]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* LIGAND-RXN:
−
{{#set: common name=octanoyl-CoA ligase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01321 R01321]
−
{{#set: common name=long chain acyl-coA synthetase}}
+
* UNIPROT:
−
{{#set: common name=long chain acyl-CoA synthetase}}
+
** [http://www.uniprot.org/uniprot/P17898 P17898]
−
{{#set: ec number=EC-6.2.1.3}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: gene associated=Ec-02_006430|Ec-12_008720|Ec-03_003710|Ec-01_001560}}
+
{{#set: ec number=EC-2.7.8.2}}
−
{{#set: in pathway=PWY-6920|P221-PWY}}
+
{{#set: in pathway=PWY4FS-2|PWY-3561|PWY-6804|PWY-7367|PWY3O-450}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:14, 21 March 2018

Reaction RXN-5781

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY4FS-2, phosphatidylcholine biosynthesis II: PWY4FS-2
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-3561, choline biosynthesis III: PWY-3561
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6804, diacylglycerol biosynthesis (PUFA enrichment in oilseed): PWY-6804
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7367, phosphatidylcholine resynthesis via glycerophosphocholine: PWY-7367
    • 1 reactions found over 3 reactions in the full pathway
  • PWY3O-450, phosphatidylcholine biosynthesis I: PWY3O-450
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




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