Difference between revisions of "Ec-02 001660"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10734 RXN-10734] == * direction: ** LEFT-TO-RIGHT * common name: ** Type III Polyketide Synthas...")
 
(Created page with "Category:Gene == Gene Ec-02_001660 == * left end position: ** 1964450 * transcription direction: ** NEGATIVE * right end position: ** 1985812 * centisome position: ** 30.0...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10734 RXN-10734] ==
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== Gene Ec-02_001660 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1964450
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* common name:
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* transcription direction:
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** Type III Polyketide Synthase (phloroglucinol synthase)
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** NEGATIVE
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** Type III Polyketide Synthase
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* right end position:
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* ec number:
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** 1985812
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** [http://enzyme.expasy.org/EC/2.3.1 EC-2.3.1]
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* centisome position:
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** 30.09364   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0055_0048
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** Esi0055_0048
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-12086]]
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** 8 [[MALONYL-COA]][c] '''+''' 7 [[PROTON]][c] '''=>''' 8 [[CO-A]][c] '''+''' 1 [[CPD-11555]][c] '''+''' 8 [[CARBON-DIOXIDE]][c] '''+''' 1 [[WATER]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 8 malonyl-CoA[c] '''+''' 7 H+[c] '''=>''' 8 coenzyme A[c] '''+''' 1 octoketide[c] '''+''' 8 CO2[c] '''+''' 1 H2O[c]
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* Reaction: [[RXN-12579]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: go-term
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[TRIACYLGLYCEROL-LIPASE-RXN]]
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* [[Ec-07_006660]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: go-term
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***AUTOMATED-NAME-MATCH
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== Pathways associated ==
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* [[Ec-02_004580]]
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* [[LIPAS-PWY]]
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** ESILICULOSUS_GENOME
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* [[PWY-6857]]
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***AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWY-6312]], barbaloin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6312 PWY-6312]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=1964450}}
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{{#set: common name=Type III Polyketide Synthase (phloroglucinol synthase)}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=Type III Polyketide Synthase}}
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{{#set: right end position=1985812}}
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{{#set: ec number=EC-2.3.1}}
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{{#set: centisome position=30.09364    }}
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{{#set: gene associated=Ec-07_006660|Ec-02_004580}}
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{{#set: common name=Esi_0055_0048|Esi0055_0048}}
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{{#set: in pathway=PWY-6312}}
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{{#set: reaction associated=RXN-12086|RXN-12579|TRIACYLGLYCEROL-LIPASE-RXN}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=LIPAS-PWY|PWY-6857}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 20:14, 21 March 2018

Gene Ec-02_001660

  • left end position:
    • 1964450
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 1985812
  • centisome position:
    • 30.09364
  • Synonym(s):
    • Esi_0055_0048
    • Esi0055_0048

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-02_001660&oldid=25557"