Difference between revisions of "Ec-00 007350"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1882 RXN-1882] == * direction: ** REVERSIBLE * common name: ** GDP-mannose 3,5-epimerase * ec n...")
(Created page with "Category:Gene == Gene Ec-00_007350 == * left end position: ** 11795180 * transcription direction: ** POSITIVE * right end position: ** 11796987 * centisome position: ** 62...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1882 RXN-1882] ==
+
== Gene Ec-00_007350 ==
−
* direction:
+
* left end position:
−
** REVERSIBLE
+
** 11795180
−
* common name:
+
* transcription direction:
−
** GDP-mannose 3,5-epimerase
+
** POSITIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/5.1.3.18 EC-5.1.3.18]
+
** 11796987
 +
* centisome position:
 +
** 62.255417   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0552_0015
 +
** Esi0552_0015
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[4OHBENZOATE-OCTAPRENYLTRANSFER-RXN]]
−
** 1 [[GDP-MANNOSE]][c] '''<=>''' 1 [[GDP-L-GALACTOSE]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: automated-name-match
−
** 1 GDP-&alpha;-D-mannose[c] '''<=>''' 1 GDP-&beta;-L-galactose[c]
+
* Reaction: [[GPPSYN-RXN]]
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-06_004510]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[aragem]]
+
−
== Pathways  ==
+
−
* [[PWY4FS-12]], VTC2 cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-12 PWY4FS-12]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
−
* [[PWY4FS-13]], extended VTC2 cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-13 PWY4FS-13]
+
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY-5115]], GDP-L-galactose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5115 PWY-5115]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
−
* [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-882 PWY-882]
+
−
** '''7''' reactions found over '''8''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-aragem]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: go-term
 +
== Pathways associated ==
 +
* [[PWY-7736]]
 +
* [[PWY-7410]]
 +
* [[PWY-6859]]
 +
* [[PWY-7709]]
 +
* [[PWY-6383]]
 +
* [[PWY-7182]]
 +
* [[PWY-6708]]
 +
* [[PWY-7141]]
 +
* [[PWY-5123]]
 +
* [[PWY-5122]]
 +
* [[PWY-7102]]
 +
* [[PWY-7659]]
 +
* [[PWY-5870]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=11795180}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11144 11144]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=11796987}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00889 R00889]
+
{{#set: centisome position=62.255417    }}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: common name=Esi_0552_0015|Esi0552_0015}}
−
{{#set: common name=GDP-mannose 3,5-epimerase}}
+
{{#set: reaction associated=4OHBENZOATE-OCTAPRENYLTRANSFER-RXN|GPPSYN-RXN}}
−
{{#set: ec number=EC-5.1.3.18}}
+
{{#set: pathway associated=PWY-7736|PWY-7410|PWY-6859|PWY-7709|PWY-6383|PWY-7182|PWY-6708|PWY-7141|PWY-5123|PWY-5122|PWY-7102|PWY-7659|PWY-5870}}
−
{{#set: gene associated=Ec-06_004510}}
+
−
{{#set: in pathway=PWY4FS-12|PWY4FS-13|PWY-5115|PWY-882}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:15, 21 March 2018

Gene Ec-00_007350

  • left end position:
    • 11795180
  • transcription direction:
    • POSITIVE
  • right end position:
    • 11796987
  • centisome position:
    • 62.255417
  • Synonym(s):
    • Esi_0552_0015
    • Esi0552_0015

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-00_007350&oldid=25604"