Difference between revisions of "RXN6666-4"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYPHENYLACETATE-DEGRADATION-PWY 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY] == * taxonomic range:...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN6666-4 RXN6666-4] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYPHENYLACETATE-DEGRADATION-PWY 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN6666-4 RXN6666-4] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
+
** LEFT-TO-RIGHT
−
* common name:
+
* ec number:
−
** 4-hydroxyphenylacetate degradation
+
** [http://enzyme.expasy.org/EC/1.4.3.4 EC-1.4.3.4]
 
* Synonym(s):
 
* Synonym(s):
−
** 4-HPA degradation
 
−
** homoprotocatechuate degradation
 
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''1''' reactions found over '''8''' reactions in the full pathway
+
* With identifiers:
−
* [[4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN]]
+
** 1 [[DOPAMINE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[34-DIHYDROXYPHENYLACETALDEHYDE]][c]
−
** 1 associated gene(s):
+
* With common name(s):
−
*** [[Ec-11_002460]]
+
** 1 dopamine[c] '''+''' 1 oxygen[c] '''+''' 1 H2O[c] '''=>''' 1 ammonium[c] '''+''' 1 hydrogen peroxide[c] '''+''' 1 3,4-dihydroxyphenylacetaldehyde[c]
−
** 1 reconstruction source(s) associated:
+
 
−
*** [[orthology-aragem]]
+
== Genes associated with this reaction  ==
−
== Reaction(s) not found ==
+
Genes have been associated with this reaction based on different elements listed below.
−
* [http://metacyc.org/META/NEW-IMAGE?object=1.13.11.15-RXN 1.13.11.15-RXN]
+
* Gene: [[Ec-15_002920]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=4.1.1.68-RXN 4.1.1.68-RXN]
+
** Source: [[orthology-aragem]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=5.3.3.10-RXN 5.3.3.10-RXN]
+
* Gene: [[Ec-15_002910]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=CHMS-DEHYDROGENASE-RXN CHMS-DEHYDROGENASE-RXN]
+
** Source: [[orthology-aragem]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYHEPTA-DIENEDIOATE-HYDROXY-RXN HYDROXYHEPTA-DIENEDIOATE-HYDROXY-RXN]
+
== Pathways  ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8505 RXN-8505]
+
* [[PWY-7431]], aromatic biogenic amine degradation (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7431 PWY-7431]
−
* [http://metacyc.org/META/NEW-IMAGE?object=SUCCSEMIALDDEHYDROG-RXN SUCCSEMIALDDEHYDROG-RXN]
+
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY6666-2]], dopamine degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY6666-2 PWY6666-2]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-1224}}
+
* RHEA:
−
{{#set: common name=4-hydroxyphenylacetate degradation}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27946 27946]
−
{{#set: common name=4-HPA degradation|homoprotocatechuate degradation}}
+
* LIGAND-RXN:
−
{{#set: reaction found=1}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04300 R04300]
−
{{#set: total reaction=8}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: completion rate=13.0}}
+
{{#set: ec number=EC-1.4.3.4}}
 +
{{#set: gene associated=Ec-15_002920|Ec-15_002910}}
 +
{{#set: in pathway=PWY-7431|PWY6666-2}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:16, 21 March 2018

Reaction RXN6666-4

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7431, aromatic biogenic amine degradation (bacteria): PWY-7431
    • 2 reactions found over 8 reactions in the full pathway
  • PWY6666-2, dopamine degradation: PWY6666-2
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN6666-4&oldid=25715"