Difference between revisions of "Ec-11 005000"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6886 PWY-6886] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-186801 TAX-...")
(Created page with "Category:Gene == Gene Ec-11_005000 == * left end position: ** 5024441 * transcription direction: ** NEGATIVE * right end position: ** 5028060 * centisome position: ** 79.8...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6886 PWY-6886] ==
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== Gene Ec-11_005000 ==
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* taxonomic range:
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* left end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-186801 TAX-186801]
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** 5024441
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
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* transcription direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** NEGATIVE
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* common name:
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* right end position:
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** 1-butanol autotrophic biosynthesis (engineered)
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** 5028060
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* centisome position:
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** 79.88417   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0071_0065
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** Esi0071_0065
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** HMT
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''8''' reactions found over '''11''' reactions in the full pathway
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* Reaction: [[HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN]]
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* [[2PGADEHYDRAT-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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** 3 associated gene(s):
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*** Assignment: go-term
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*** [[Ec-27_004000]]
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** Source: [[orthology-aragem]]
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*** [[Ec-26_004120]]
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* Reaction: [[MMUM-RXN]]
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*** [[Ec-14_005400]]
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** Source: [[annotation-esiliculosus_genome]]
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** 2 reconstruction source(s) associated:
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*** Assignment: ec-number
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*** [[annotation-esiliculosus_genome]]
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== Pathways associated ==
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*** [[orthology-aragem]]
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* [[ADENOSYLHOMOCYSCAT-PWY]]
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* [[3PGAREARR-RXN]]
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* [[PWY-702]]
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** 7 associated gene(s):
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* [[PWY-5441]]
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*** [[Ec-24_002670]]
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*** [[Ec-03_002170]]
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*** [[Ec-27_000330]]
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*** [[Ec-03_002160]]
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*** [[Ec-01_000980]]
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*** [[Ec-06_009930]]
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*** [[Ec-10_005410]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[CALVIN-PWY]]
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** 0 associated gene:
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* [[PEPDEPHOS-RXN]]
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** 3 associated gene(s):
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*** [[Ec-26_004170]]
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*** [[Ec-12_000950]]
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*** [[Ec-06_006860]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[PHOSGLYPHOS-RXN]]
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** 6 associated gene(s):
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*** [[Ec-12_004530]]
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*** [[Ec-01_001350]]
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*** [[Ec-08_002400]]
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*** [[Ec-12_004550]]
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*** [[Ec-21_005710]]
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*** [[Ec-21_004220]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[PWY-101]]
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** 0 associated gene:
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* [[PWY-6883]]
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** 0 associated gene:
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* [[PYRUVDEH-RXN]]
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** 8 associated gene(s):
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*** [[Ec-01_010530]]
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*** [[Ec-25_000020]]
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*** [[Ec-27_000530]]
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*** [[Ec-18_000080]]
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*** [[Ec-27_004160]]
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*** [[Ec-23_002710]]
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*** [[Ec-25_000140]]
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*** [[Ec-18_003420]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-186801}}
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{{#set: left end position=5024441}}
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{{#set: taxonomic range=TAX-33682}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: taxonomic range=TAX-1117}}
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{{#set: right end position=5028060}}
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{{#set: common name=1-butanol autotrophic biosynthesis (engineered)}}
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{{#set: centisome position=79.88417    }}
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{{#set: reaction found=8}}
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{{#set: common name=Esi_0071_0065|Esi0071_0065|HMT}}
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{{#set: total reaction=11}}
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{{#set: reaction associated=HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN|MMUM-RXN}}
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{{#set: completion rate=73.0}}
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{{#set: pathway associated=ADENOSYLHOMOCYSCAT-PWY|PWY-702|PWY-5441}}

Latest revision as of 19:16, 21 March 2018

Gene Ec-11_005000

  • left end position:
    • 5024441
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 5028060
  • centisome position:
    • 79.88417
  • Synonym(s):
    • Esi_0071_0065
    • Esi0071_0065
    • HMT

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-11_005000&oldid=25722"