Difference between revisions of "RXN-5466"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=D-METHYL-MALONYL-COA D-METHYL-MALONYL-COA] == * smiles: ** CC(C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5466 RXN-5466] == * direction: ** LEFT-TO-RIGHT * common name: ** Dolichyl-P-Man:Man(5)GlcNAc(2...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=D-METHYL-MALONYL-COA D-METHYL-MALONYL-COA] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5466 RXN-5466] ==
−
* smiles:
+
* direction:
−
** CC(C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])C([O-])=O
+
** LEFT-TO-RIGHT
−
* inchi key:
+
−
** InChIKey=MZFOKIKEPGUZEN-IBNUZSNCSA-I
+
 
* common name:
 
* common name:
−
** (S)-methylmalonyl-CoA
+
** Dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl mannosyltransferase, family GT58
−
* molecular weight:
+
* ec number:
−
** 862.568   
+
** [http://enzyme.expasy.org/EC/2.4.1.258 EC-2.4.1.258]
 
* Synonym(s):
 
* Synonym(s):
−
** D-methylmalonyl-CoA
 
−
** methyl-malonyl-coenzyme A
 
−
** CH3-malonyl-CoA
 
−
** (2S)-methyl-malonyl-CoA
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
== Reaction(s) of unknown directionality ==
+
** 1 [[CPD-171]][c] '''+''' 1 [[CPD-5164]][c] '''=>''' 1 [[CPD-5165]][c] '''+''' 1 [[DOLICHOLP]][c] '''+''' 1 [[PROTON]][c]
−
* [[PROPIONYL-COA-CARBOXY-RXN]]
+
* With common name(s):
 +
** 1 a dolichyl β-D-mannosyl phosphate[c] '''+''' 1 a (mannosyl)5-(N-acetylglucosaminyl)2-diphosphodolichol[c] '''=>''' 1 a (mannosyl)6-(N-acetylglucosaminyl)2-diphosphodolichol[c] '''+''' 1 a dolichyl phosphate[c] '''+''' 1 H+[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-12_007710]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
 +
** '''19''' reactions found over '''19''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* CAS : 104809-02-1
+
* RHEA:
−
* BIGG : 35689
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29530 29530]
−
* PUBCHEM:
+
* LIGAND-RXN:
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=45266561 45266561]
+
** [http://www.genome.jp/dbget-bin/www_bget?R06258 R06258]
−
* HMDB : HMDB01269
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* LIGAND-CPD:
+
{{#set: common name=Dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl mannosyltransferase, family GT58}}
−
** [http://www.genome.jp/dbget-bin/www_bget?C00683 C00683]
+
{{#set: ec number=EC-2.4.1.258}}
−
* CHEBI:
+
{{#set: gene associated=Ec-12_007710}}
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57327 57327]
+
{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
−
* METABOLIGHTS : MTBLC57327
+
{{#set: reconstruction category=annotation}}
−
{{#set: smiles=CC(C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])C([O-])=O}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
{{#set: inchi key=InChIKey=MZFOKIKEPGUZEN-IBNUZSNCSA-I}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: common name=(S)-methylmalonyl-CoA}}
+
−
{{#set: molecular weight=862.568    }}
+
−
{{#set: common name=D-methylmalonyl-CoA|methyl-malonyl-coenzyme A|CH3-malonyl-CoA|(2S)-methyl-malonyl-CoA}}
+
−
{{#set: consumed or produced by=PROPIONYL-COA-CARBOXY-RXN}}
+

Latest revision as of 20:16, 21 March 2018

Reaction RXN-5466

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl mannosyltransferase, family GT58
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a dolichyl β-D-mannosyl phosphate[c] + 1 a (mannosyl)5-(N-acetylglucosaminyl)2-diphosphodolichol[c] => 1 a (mannosyl)6-(N-acetylglucosaminyl)2-diphosphodolichol[c] + 1 a dolichyl phosphate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-5466&oldid=25738"