Difference between revisions of "CHD-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CDP-CHOLINE CDP-CHOLINE] == * smiles: ** C[N+](C)(C)CCOP([O-])(=O)OP([O-])(=O)OCC1(OC(C(O)C(O)1...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHD-RXN CHD-RXN] == * direction: ** REVERSIBLE * common name: ** choline dehydrogenase * ec number:...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CDP-CHOLINE CDP-CHOLINE] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHD-RXN CHD-RXN] ==
−
* smiles:
+
* direction:
−
** C[N+](C)(C)CCOP([O-])(=O)OP([O-])(=O)OCC1(OC(C(O)C(O)1)N2(C=CC(=NC2=O)N))
+
** REVERSIBLE
−
* inchi key:
+
−
** InChIKey=RZZPDXZPRHQOCG-OJAKKHQRSA-M
+
 
* common name:
 
* common name:
−
** CDP-choline
+
** choline dehydrogenase
−
* molecular weight:
+
* ec number:
−
** 487.319   
+
** [http://enzyme.expasy.org/EC/1.1.99.1 EC-1.1.99.1]
 
* Synonym(s):
 
* Synonym(s):
−
** citicoline
 
−
** citicholine
 
−
** cidifos
 
−
** cyticholine
 
−
** cytidine 5'-diphosphocholine
 
−
** cytidine diphosphate choline
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
* [[2.7.7.15-RXN]]
+
** 1 [[Acceptor]][c] '''+''' 1 [[CHOLINE]][c] '''<=>''' 1 [[Donor-H2]][c] '''+''' 1 [[BETAINE_ALDEHYDE]][c]
−
== Reaction(s) of unknown directionality ==
+
* With common name(s):
−
* [[RXN-5781]]
+
** 1 an oxidized unknown electron acceptor[c] '''+''' 1 choline[c] '''<=>''' 1 an reduced unknown electron acceptor[c] '''+''' 1 betaine aldehyde[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-00_005920]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
== Pathways  ==
 +
* [[CHOLINE-BETAINE-ANA-PWY]], choline degradation I: [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-BETAINE-ANA-PWY CHOLINE-BETAINE-ANA-PWY]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[BETSYN-PWY]], glycine betaine biosynthesis I (Gram-negative bacteria): [http://metacyc.org/META/NEW-IMAGE?object=BETSYN-PWY BETSYN-PWY]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* CAS : 987-78-0
+
* RHEA:
−
* PUBCHEM:
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17433 17433]
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25202509 25202509]
+
* LIGAND-RXN:
−
* CHEBI:
+
** [http://www.genome.jp/dbget-bin/www_bget?R01025 R01025]
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58779 58779]
+
* UNIPROT:
−
* LIGAND-CPD:
+
** [http://www.uniprot.org/uniprot/P17444 P17444]
−
** [http://www.genome.jp/dbget-bin/www_bget?C00307 C00307]
+
{{#set: direction=REVERSIBLE}}
−
* HMDB : HMDB01413
+
{{#set: common name=choline dehydrogenase}}
−
{{#set: smiles=C[N+](C)(C)CCOP([O-])(=O)OP([O-])(=O)OCC1(OC(C(O)C(O)1)N2(C=CC(=NC2=O)N))}}
+
{{#set: ec number=EC-1.1.99.1}}
−
{{#set: inchi key=InChIKey=RZZPDXZPRHQOCG-OJAKKHQRSA-M}}
+
{{#set: gene associated=Ec-00_005920}}
−
{{#set: common name=CDP-choline}}
+
{{#set: in pathway=CHOLINE-BETAINE-ANA-PWY|BETSYN-PWY}}
−
{{#set: molecular weight=487.319    }}
+
{{#set: reconstruction category=annotation}}
−
{{#set: common name=citicoline|citicholine|cidifos|cyticholine|cytidine 5'-diphosphocholine|cytidine diphosphate choline}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
{{#set: produced by=2.7.7.15-RXN}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reversible reaction associated=RXN-5781}}
+

Latest revision as of 19:16, 21 March 2018

Reaction CHD-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • choline dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 an oxidized unknown electron acceptor[c] + 1 choline[c] <=> 1 an reduced unknown electron acceptor[c] + 1 betaine aldehyde[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CHD-RXN&oldid=25757"