Difference between revisions of "Ec-16 004330"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Ec-16_004330 == * left end position: ** 4479527 * transcription direction: ** POSITIVE * right end position: ** 4483642 * centisome position: ** 83.9...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Gene]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871] ==
+
== Gene Ec-16_004330 ==
−
* taxonomic range:
+
* left end position:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4891 TAX-4891]
+
** 4479527
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
* transcription direction:
−
* common name:
+
** POSITIVE
−
** 3-methylbutanol biosynthesis (engineered)
+
* right end position:
 +
** 4483642
 +
* centisome position:
 +
** 83.92314   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0227_0056
 +
** Esi0227_0056
 +
** GGPPS1, C-term
  
−
== Reaction(s) found ==
+
== Reactions associated ==
−
'''5''' reactions found over '''7''' reactions in the full pathway
+
* Reaction: [[FARNESYLTRANSTRANSFERASE-RXN]]
−
* [[2-ISOPROPYLMALATESYN-RXN]]
+
** Source: [[annotation-esiliculosus_genome]]
−
* [[3-ISOPROPYLMALDEHYDROG-RXN]]
+
*** Assignment: ec-number
−
* [[3-ISOPROPYLMALISOM-RXN]]
+
** Source: [[orthology-aragem]]
−
* [[RXN-7800]]
+
* Reaction: [[FPPSYN-RXN]]
−
* [[RXN-8991]]
+
** Source: [[orthology-aragem]]
−
== Reaction(s) not found ==
+
* Reaction: [[GPPSYN-RXN]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7692 RXN-7692]
+
** Source: [[orthology-aragem]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7693 RXN-7693]
+
== Pathways associated ==
 +
* [[PWY-7736]]
 +
* [[PWY-7492]]
 +
* [[PWY-6659]]
 +
* [[PWY-6383]]
 +
* [[PWY-6691]]
 +
* [[PWY-6859]]
 +
* [[PWY-7709]]
 +
* [[PWY-7102]]
 +
* [[PWY-7182]]
 +
* [[PWY-5120]]
 +
* [[PWY-5123]]
 +
* [[PWY-5122]]
 +
* [[PWY-7141]]
 +
* [[PWY-7720]]
 +
* [[PWY-7721]]
 +
* [[PWY-7517]]
 +
* [[PWY-7410]]
 +
* [[PWY-7659]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-4891}}
+
{{#set: left end position=4479527}}
−
{{#set: taxonomic range=TAX-2}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: common name=3-methylbutanol biosynthesis (engineered)}}
+
{{#set: right end position=4483642}}
−
{{#set: reaction found=5}}
+
{{#set: centisome position=83.92314    }}
−
{{#set: reaction not found=7}}
+
{{#set: common name=Esi_0227_0056|Esi0227_0056|GGPPS1, C-term}}
−
{{#set: completion rate=71.0}}
+
{{#set: reaction associated=FARNESYLTRANSTRANSFERASE-RXN|FPPSYN-RXN|GPPSYN-RXN}}
 +
{{#set: pathway associated=PWY-7736|PWY-7492|PWY-6659|PWY-6383|PWY-6691|PWY-6859|PWY-7709|PWY-7102|PWY-7182|PWY-5120|PWY-5123|PWY-5122|PWY-7141|PWY-7720|PWY-7721|PWY-7517|PWY-7410|PWY-7659}}

Latest revision as of 20:16, 21 March 2018

Gene Ec-16_004330

  • left end position:
    • 4479527
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4483642
  • centisome position:
    • 83.92314
  • Synonym(s):
    • Esi_0227_0056
    • Esi0227_0056
    • GGPPS1, C-term

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-16_004330&oldid=25766"