Difference between revisions of "Ec-16 004990"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHD-RXN CHD-RXN] == * direction: ** REVERSIBLE * common name: ** choline dehydrogenase * ec number:...")
 
(Created page with "Category:Gene == Gene Ec-16_004990 == * left end position: ** 5099733 * transcription direction: ** POSITIVE * right end position: ** 5109922 * centisome position: ** 95.5...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHD-RXN CHD-RXN] ==
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== Gene Ec-16_004990 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 5099733
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* common name:
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* transcription direction:
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** choline dehydrogenase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.1.99.1 EC-1.1.99.1]
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** 5109922
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* centisome position:
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** 95.542595   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0164_0008
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** Esi0164_0008
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN0-2601]]
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** 1 [[Acceptor]][c] '''+''' 1 [[CHOLINE]][c] '''<=>''' 1 [[BETAINE_ALDEHYDE]][c] '''+''' 1 [[Donor-H2]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 an oxidized unknown electron acceptor[c] '''+''' 1 choline[c] '''<=>''' 1 betaine aldehyde[c] '''+''' 1 an reduced unknown electron acceptor[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-00_005920]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways  ==
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* [[CHOLINE-BETAINE-ANA-PWY]], choline degradation I: [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-BETAINE-ANA-PWY CHOLINE-BETAINE-ANA-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[BETSYN-PWY]], glycine betaine biosynthesis I (Gram-negative bacteria): [http://metacyc.org/META/NEW-IMAGE?object=BETSYN-PWY BETSYN-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=5099733}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17433 17433]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=5109922}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01025 R01025]
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{{#set: centisome position=95.542595    }}
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* UNIPROT:
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{{#set: common name=Esi_0164_0008|Esi0164_0008}}
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** [http://www.uniprot.org/uniprot/P17444 P17444]
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{{#set: reaction associated=RXN0-2601}}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=choline dehydrogenase}}
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{{#set: ec number=EC-1.1.99.1}}
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{{#set: gene associated=Ec-00_005920}}
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{{#set: in pathway=CHOLINE-BETAINE-ANA-PWY|BETSYN-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 20:17, 21 March 2018

Gene Ec-16_004990

  • left end position:
    • 5099733
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5109922
  • centisome position:
    • 95.542595
  • Synonym(s):
    • Esi_0164_0008
    • Esi0164_0008

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-16_004990&oldid=25792"