Difference between revisions of "RXN-16114"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-ORNITHINE L-ORNITHINE] == * smiles: ** C(C[N+])CC([N+])C([O-])=O * inchi key: ** InChIKey=AHL...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16114 RXN-16114] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-ORNITHINE L-ORNITHINE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16114 RXN-16114] ==
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* smiles:
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* direction:
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** C(C[N+])CC([N+])C([O-])=O
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** LEFT-TO-RIGHT
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* inchi key:
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* ec number:
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** InChIKey=AHLPHDHHMVZTML-BYPYZUCNSA-O
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** [http://enzyme.expasy.org/EC/1.3.1.93 EC-1.3.1.93]
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* common name:
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** L-ornithine
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* molecular weight:
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** 133.17   
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* Synonym(s):
 
* Synonym(s):
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** Ornithine
 
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** 2, 5-diaminovaleric acid
 
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** 2, 5-diaminopentanoic acid
 
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** 2, 5-diaminopentanoate
 
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** α,δ-diaminovaleric acid
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[ORNITHINE-CYCLODEAMINASE-RXN]]
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* With identifiers:
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* [[biomass_rxn]]
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** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[CPD-17368]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CPD-17323]][c]
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* [[ORNDECARBOX-RXN]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 trans-adre-2-enoyl-CoA[c] '''=>''' 1 NADP+[c] '''+''' 1 adrenoyl-CoA[c]
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* [[GLUTAMATE-N-ACETYLTRANSFERASE-RXN]]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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* [[RXN-13482]]
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== Pathways  ==
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* [[ORNITHINE-GLU-AMINOTRANSFERASE-RXN]]
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* [[PWY-7728]], (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis II (4-desaturase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7728 PWY-7728]
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* [[ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[ACETYLORNDEACET-RXN]]
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* [[PWY-7726]], (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7726 PWY-7726]
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* [[ORNCARBAMTRANSFER-RXN]]
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** '''13''' reactions found over '''13''' reactions in the full pathway
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* [[ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN-L-ORNITHINE/P-HYDROXY-PHENYLPYRUVATE//TYR/L-GLUTAMATE_GAMMA-SEMIALDEHYDE.73.]]
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== Reconstruction information  ==
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* [[ARGINASE-RXN]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* BIGG : 37976
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: ec number=EC-1.3.1.93}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=6992088 6992088]
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{{#set: in pathway=PWY-7728|PWY-7726}}
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* HMDB : HMDB00214
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{{#set: reconstruction category=annotation}}
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* LIGAND-CPD:
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00077 C00077]
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{{#set: reconstruction tool=pathwaytools}}
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* CHEMSPIDER:
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** [http://www.chemspider.com/Chemical-Structure.5360242.html 5360242]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=46911 46911]
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* METABOLIGHTS : MTBLC46911
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{{#set: smiles=C(C[N+])CC([N+])C([O-])=O}}
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{{#set: inchi key=InChIKey=AHLPHDHHMVZTML-BYPYZUCNSA-O}}
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{{#set: common name=L-ornithine}}
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{{#set: molecular weight=133.17    }}
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{{#set: common name=Ornithine|2, 5-diaminovaleric acid|2, 5-diaminopentanoic acid|2, 5-diaminopentanoate|α,δ-diaminovaleric acid}}
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{{#set: consumed by=ORNITHINE-CYCLODEAMINASE-RXN|biomass_rxn|ORNDECARBOX-RXN}}
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{{#set: produced by=GLUTAMATE-N-ACETYLTRANSFERASE-RXN}}
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{{#set: reversible reaction associated=RXN-13482|ORNITHINE-GLU-AMINOTRANSFERASE-RXN|ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN|ACETYLORNDEACET-RXN|ORNCARBAMTRANSFER-RXN|ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN-L-ORNITHINE/P-HYDROXY-PHENYLPYRUVATE//TYR/L-GLUTAMATE_GAMMA-SEMIALDEHYDE.73.|ARGINASE-RXN}}
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Latest revision as of 19:17, 21 March 2018

Reaction RXN-16114

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 NADPH[c] + 1 trans-adre-2-enoyl-CoA[c] => 1 NADP+[c] + 1 adrenoyl-CoA[c]

Genes associated with this reaction

Pathways

  • PWY-7728, (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis II (4-desaturase): PWY-7728
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7726, (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): PWY-7726
    • 13 reactions found over 13 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-16114&oldid=25865"