Difference between revisions of "RXN-9539"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HCO3 HCO3] == * smiles: ** C([O-])(=O)O * inchi key: ** InChIKey=BVKZGUZCCUSVTD-UHFFFAOYSA-M *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9539 RXN-9539] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-palmitoyl-[acyl-carrier...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HCO3 HCO3] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9539 RXN-9539] ==
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* smiles:
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* direction:
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** C([O-])(=O)O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=BVKZGUZCCUSVTD-UHFFFAOYSA-M
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* common name:
 
* common name:
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** hydrogen carbonate
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** 3-oxo-palmitoyl-[acyl-carrier protein] synthase
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* molecular weight:
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** Beta-ketoacyl synthase, N-terminal
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** 61.017   
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** Thiolase-like, subgroup
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** beta-ketoacyl synthase, partial
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** 3-oxoacyl-[acyl-carrier-protein] synthase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* Synonym(s):
 
* Synonym(s):
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** carbonate
 
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** CO3-2
 
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** CO32-
 
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** HCO3-
 
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** HCO3
 
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** bicarbonate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[PEPCARBOX-RXN]]
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* With identifiers:
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* [[CARBPSYN-RXN]]
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** 1 [[MALONYL-ACP]][c] '''+''' 1 [[Myristoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[3-oxo-palmitoyl-ACPs]][c] '''+''' 1 [[ACP]][c]
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* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
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* With common name(s):
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* [[RXN-16909]]
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** 1 a malonyl-[acp][c] '''+''' 1 a myristoyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 a 3-oxo-palmitoyl-[acp][c] '''+''' 1 a holo-[acyl-carrier protein][c]
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* [[RXN-13202]]
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* [[RXN1G-4355]]
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== Genes associated with this reaction  ==
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* [[METHYLCROTONYL-COA-CARBOXYLASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PYRUVATE-CARBOXYLASE-RXN]]
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* Gene: [[Ec-27_002090]]
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== Reaction(s) known to produce the compound ==
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** Source: [[annotation-esiliculosus_genome]]
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* [[1.2.1.27-RXN]]
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*** Assignment: EC-NUMBER
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* [[RXN-11213]]
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** Source: [[orthology-aragem]]
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== Reaction(s) of unknown directionality ==
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** Source: [[orthology-aragem]]
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* [[RXN0-5224]]
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* Gene: [[Ec-12_000650]]
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* [[PROPIONYL-COA-CARBOXY-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN-14569]]
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*** Assignment: GO-TERM
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-27_003480]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-12_000640]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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** '''28''' reactions found over '''31''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 71-52-3
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{{#set: direction=LEFT-TO-RIGHT}}
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* CAS : 144-55-8
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{{#set: common name=3-oxo-palmitoyl-[acyl-carrier protein] synthase}}
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* BIGG : 34509
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{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
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* PUBCHEM:
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{{#set: common name=Thiolase-like, subgroup}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=769 769]
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{{#set: common name=beta-ketoacyl synthase, partial}}
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* HMDB : HMDB00595
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{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
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* LIGAND-CPD:
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{{#set: ec number=EC-2.3.1.41}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00288 C00288]
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{{#set: gene associated=Ec-27_002090|Ec-12_000650|Ec-27_003480|Ec-12_000640}}
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* CHEMSPIDER:
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{{#set: in pathway=PWY-5971}}
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** [http://www.chemspider.com/Chemical-Structure.749.html 749]
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{{#set: reconstruction category=orthology|annotation}}
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* CHEBI:
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17544 17544]
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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* METABOLIGHTS : MTBLC17544
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{{#set: smiles=C([O-])(=O)O}}
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{{#set: inchi key=InChIKey=BVKZGUZCCUSVTD-UHFFFAOYSA-M}}
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{{#set: common name=hydrogen carbonate}}
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{{#set: molecular weight=61.017    }}
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{{#set: common name=carbonate|CO3-2|CO32-|HCO3-|HCO3|bicarbonate}}
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{{#set: consumed by=PEPCARBOX-RXN|CARBPSYN-RXN|ACETYL-COA-CARBOXYLTRANSFER-RXN|RXN-16909|RXN-13202|RXN1G-4355|METHYLCROTONYL-COA-CARBOXYLASE-RXN|PYRUVATE-CARBOXYLASE-RXN}}
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{{#set: produced by=1.2.1.27-RXN|RXN-11213}}
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{{#set: reversible reaction associated=RXN0-5224|PROPIONYL-COA-CARBOXY-RXN|RXN-14569}}
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Latest revision as of 19:17, 21 March 2018

Reaction RXN-9539

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxo-palmitoyl-[acyl-carrier protein] synthase
    • Beta-ketoacyl synthase, N-terminal
    • Thiolase-like, subgroup
    • beta-ketoacyl synthase, partial
    • 3-oxoacyl-[acyl-carrier-protein] synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
    • 28 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

"3-oxo-palmitoyl-[acyl-carrier protein] synthase" cannot be used as a page name in this wiki.


"3-oxoacyl-[acyl-carrier-protein] synthase" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-9539&oldid=25894"