Difference between revisions of "PWY-5537"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHD-RXN CHD-RXN] == * direction: ** REVERSIBLE * common name: ** choline dehydrogenase * ec number:...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5537 PWY-5537] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-3...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHD-RXN CHD-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5537 PWY-5537] ==
* direction:
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* taxonomic range:
** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-33154]
 
* common name:
 
* common name:
** choline dehydrogenase
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** pyruvate fermentation to acetate V
* ec number:
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** [http://enzyme.expasy.org/EC/1.1.99.1 EC-1.1.99.1]
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* Synonym(s):
 
* Synonym(s):
 +
** acetate fermentation
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** acetate:succinate CoA transferase/SCoAS cycle
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** ASCT cycle
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''2''' reactions found over '''4''' reactions in the full pathway
** 1 [[Acceptor]][c] '''+''' 1 [[CHOLINE]][c] '''<=>''' 1 [[Donor-H2]][c] '''+''' 1 [[BETAINE_ALDEHYDE]][c]
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* [[PYRUVDEH-RXN]]
* With common name(s):
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** 8 associated gene(s):
** 1 an oxidized unknown electron acceptor[c] '''+''' 1 choline[c] '''<=>''' 1 an reduced unknown electron acceptor[c] '''+''' 1 betaine aldehyde[c]
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*** [[Ec-27_004160]]
 
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*** [[Ec-25_000140]]
== Genes associated with this reaction  ==
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*** [[Ec-25_000020]]
Genes have been associated with this reaction based on different elements listed below.
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*** [[Ec-01_010530]]
* Gene: [[Ec-00_005920]]
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*** [[Ec-23_002710]]
** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-27_000530]]
*** Assignment: GO-TERM
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*** [[Ec-18_000080]]
== Pathways  ==
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*** [[Ec-18_003420]]
* [[CHOLINE-BETAINE-ANA-PWY]], choline degradation I: [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-BETAINE-ANA-PWY CHOLINE-BETAINE-ANA-PWY]
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** 1 reconstruction source(s) associated:
** '''2''' reactions found over '''2''' reactions in the full pathway
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*** [[orthology-aragem]]
* [[BETSYN-PWY]], glycine betaine biosynthesis I (Gram-negative bacteria): [http://metacyc.org/META/NEW-IMAGE?object=BETSYN-PWY BETSYN-PWY]
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* [[SUCCCOASYN-RXN]]
** '''2''' reactions found over '''2''' reactions in the full pathway
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** 2 associated gene(s):
== Reconstruction information  ==
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*** [[Ec-10_000030]]
* Category: [[annotation]]
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*** [[Ec-02_001020]]
** Source: [[annotation-esiliculosus_genome]]
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** 2 reconstruction source(s) associated:
*** Tool: [[pathwaytools]]
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-5536 PWY-5536]
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-5536 PWY-5536]
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: taxonomic range=TAX-33682}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17433 17433]
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{{#set: taxonomic range=TAX-33154}}
* LIGAND-RXN:
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{{#set: common name=pyruvate fermentation to acetate V}}
** [http://www.genome.jp/dbget-bin/www_bget?R01025 R01025]
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{{#set: common name=acetate fermentation|acetate:succinate CoA transferase/SCoAS cycle|ASCT cycle}}
* UNIPROT:
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{{#set: reaction found=2}}
** [http://www.uniprot.org/uniprot/P17444 P17444]
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{{#set: total reaction=4}}
{{#set: direction=REVERSIBLE}}
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{{#set: completion rate=50.0}}
{{#set: common name=choline dehydrogenase}}
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{{#set: ec number=EC-1.1.99.1}}
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{{#set: gene associated=Ec-00_005920}}
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{{#set: in pathway=CHOLINE-BETAINE-ANA-PWY|BETSYN-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:17, 21 March 2018

Pathway PWY-5537

  • taxonomic range:
  • common name:
    • pyruvate fermentation to acetate V
  • Synonym(s):
    • acetate fermentation
    • acetate:succinate CoA transferase/SCoAS cycle
    • ASCT cycle

Reaction(s) found

2 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links