Difference between revisions of "PWY-2681"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN] == * direction:...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2681 PWY-2681] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-31...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2681 PWY-2681] ==
−
* direction:
+
* taxonomic range:
−
** REVERSIBLE
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
 
* common name:
 
* common name:
−
** Semialdehyde dehydrogenase, NAD-binding
+
** trans-zeatin biosynthesis
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.2.1.11 EC-1.2.1.11]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** trans-cytokinin biosynthesis
 +
** AMP-dependent cytokinin biosynthesis
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''2''' reactions found over '''11''' reactions in the full pathway
−
** 1 [[L-ASPARTATE-SEMIALDEHYDE]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[L-BETA-ASPARTYL-P]][c]
+
* [[RXN-4303]]
−
* With common name(s):
+
** 1 associated gene(s):
−
** 1 L-aspartate-semialdehyde[c] '''+''' 1 phosphate[c] '''+''' 1 NADP+[c] '''<=>''' 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 L-aspartyl-4-phosphate[c]
+
*** [[Ec-01_007830]]
−
 
+
** 1 reconstruction source(s) associated:
−
== Genes associated with this reaction  ==
+
*** [[orthology-aragem]]
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[RXN-4305]]
−
* Gene: [[Ec-01_007470]]
+
** 1 associated gene(s):
−
** Source: [[annotation-esiliculosus_genome]]
+
*** [[Ec-01_007830]]
−
*** Assignment: EC-NUMBER
+
** 1 reconstruction source(s) associated:
−
** Source: [[orthology-aragem]]
+
*** [[orthology-aragem]]
−
== Pathways  ==
+
== Reaction(s) not found ==
−
* [[HOMOSERSYN-PWY]], L-homoserine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERSYN-PWY HOMOSERSYN-PWY]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4304 RXN-4304]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4306 RXN-4306]
−
* [[PWY-7153]], grixazone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7153 PWY-7153]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4307 RXN-4307]
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4308 RXN-4308]
−
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DAPLYSINESYN-PWY DAPLYSINESYN-PWY]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4310 RXN-4310]
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4312 RXN-4312]
−
* [[PWY-2942]], L-lysine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4313 RXN-4313]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4314 RXN-4314]
−
* [[PWY-2941]], L-lysine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4317 RXN-4317]
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-6559]], spermidine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6559 PWY-6559]
+
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097]
+
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-6562]], norspermidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6562 PWY-6562]
+
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
−
* [[P101-PWY]], ectoine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=P101-PWY P101-PWY]
+
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-aragem]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* ARACYC:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24284 24284]
+
** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-2681 PWY-2681]
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-3193}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02291 R02291]
+
{{#set: common name=trans-zeatin biosynthesis}}
−
* UNIPROT:
+
{{#set: common name=trans-cytokinin biosynthesis|AMP-dependent cytokinin biosynthesis}}
−
** [http://www.uniprot.org/uniprot/P10539 P10539]
+
{{#set: reaction found=2}}
−
** [http://www.uniprot.org/uniprot/P41394 P41394]
+
{{#set: total reaction=11}}
−
** [http://www.uniprot.org/uniprot/P44801 P44801]
+
{{#set: completion rate=18.0}}
−
** [http://www.uniprot.org/uniprot/O67716 O67716]
+
−
** [http://www.uniprot.org/uniprot/Q59291 Q59291]
+
−
** [http://www.uniprot.org/uniprot/P57008 P57008]
+
−
** [http://www.uniprot.org/uniprot/P0A9Q9 P0A9Q9]
+
−
** [http://www.uniprot.org/uniprot/O25801 O25801]
+
−
** [http://www.uniprot.org/uniprot/Q57658 Q57658]
+
−
** [http://www.uniprot.org/uniprot/Q04797 Q04797]
+
−
** [http://www.uniprot.org/uniprot/Q56732 Q56732]
+
−
** [http://www.uniprot.org/uniprot/Q56734 Q56734]
+
−
** [http://www.uniprot.org/uniprot/P13663 P13663]
+
−
** [http://www.uniprot.org/uniprot/P23247 P23247]
+
−
** [http://www.uniprot.org/uniprot/P41399 P41399]
+
−
** [http://www.uniprot.org/uniprot/P41404 P41404]
+
−
** [http://www.uniprot.org/uniprot/Q9JN40 Q9JN40]
+
−
** [http://www.uniprot.org/uniprot/P26511 P26511]
+
−
** [http://www.uniprot.org/uniprot/Q55512 Q55512]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=Semialdehyde dehydrogenase, NAD-binding}}
+
−
{{#set: ec number=EC-1.2.1.11}}
+
−
{{#set: gene associated=Ec-01_007470}}
+
−
{{#set: in pathway=HOMOSERSYN-PWY|PWY-7153|DAPLYSINESYN-PWY|PWY-2942|PWY-2941|PWY-6559|PWY-5097|PWY-6562|P101-PWY}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:18, 21 March 2018

Pathway PWY-2681

  • taxonomic range:
  • common name:
    • trans-zeatin biosynthesis
  • Synonym(s):
    • trans-cytokinin biosynthesis
    • AMP-dependent cytokinin biosynthesis

Reaction(s) found

2 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-2681&oldid=26020"