Difference between revisions of "RXN-16081"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5123 PWY-5123] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16081 RXN-16081] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5123 PWY-5123] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16081 RXN-16081] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** LEFT-TO-RIGHT
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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* ec number:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://enzyme.expasy.org/EC/2.3.1 EC-2.3.1]
* common name:
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** trans, trans-farnesyl diphosphate biosynthesis
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* Synonym(s):
 
* Synonym(s):
** FPP biosynthesis
 
** trans, trans-farnesyl diphosphate biosynthesis
 
  
== Reaction(s) found ==
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== Reaction Formula ==
'''3''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
* [[FPPSYN-RXN]]
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** 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-17323]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CPD-17329]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
** 3 associated gene(s):
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* With common name(s):
*** [[Ec-07_006170]]
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** 1 malonyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 adrenoyl-CoA[c] '''=>''' 1 coenzyme A[c] '''+''' 1 3-oxo-tetracosatetraenoyl-CoA[c] '''+''' 1 CO2[c]
*** [[Ec-10_003020]]
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*** [[Ec-16_004330]]
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== Genes associated with this reaction  ==
** 2 reconstruction source(s) associated:
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== Pathways  ==
*** [[annotation-esiliculosus_genome]]
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* [[PWY-7726]], (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7726 PWY-7726]
*** [[orthology-aragem]]
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** '''13''' reactions found over '''13''' reactions in the full pathway
* [[GPPSYN-RXN]]
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== Reconstruction information  ==
** 12 associated gene(s):
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* Category: [[annotation]]
*** [[Ec-07_006170]]
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** Source: [[annotation-esiliculosus_genome]]
*** [[Ec-16_004330]]
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*** Tool: [[pathwaytools]]
*** [[Ec-08_002270]]
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*** [[Ec-10_003020]]
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*** [[Ec-00_007350]]
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*** [[Ec-14_006550]]
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*** [[Ec-24_003910]]
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*** [[Ec-26_003280]]
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*** [[Ec-21_000990]]
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*** [[Ec-25_002110]]
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*** [[Ec-17_001240]]
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*** [[Ec-18_000990]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[IPPISOM-RXN]]
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** 2 associated gene(s):
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*** [[Ec-11_001030]]
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*** [[Ec-18_002690]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
* ECOCYC:
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{{#set: direction=LEFT-TO-RIGHT}}
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-5123 PWY-5123]
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{{#set: ec number=EC-2.3.1}}
* ARACYC:
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{{#set: in pathway=PWY-7726}}
** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-5123 PWY-5123]
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{{#set: reconstruction category=annotation}}
{{#set: taxonomic range=TAX-2157}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
{{#set: taxonomic range=TAX-2759}}
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{{#set: reconstruction tool=pathwaytools}}
{{#set: taxonomic range=TAX-2}}
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{{#set: common name=trans, trans-farnesyl diphosphate biosynthesis}}
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{{#set: common name=FPP biosynthesis|trans, trans-farnesyl diphosphate biosynthesis}}
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{{#set: reaction found=3}}
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{{#set: total reaction=3}}
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{{#set: completion rate=100.0}}
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Latest revision as of 20:19, 21 March 2018

Reaction RXN-16081

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-7726, (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): PWY-7726
    • 13 reactions found over 13 reactions in the full pathway

Reconstruction information

External links