Difference between revisions of "Ec-20 000070"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIB5PISOM-RXN RIB5PISOM-RXN] == * direction: ** REVERSIBLE * common name: ** Ribose 5-phosphate iso...")
(Created page with "Category:Gene == Gene Ec-20_000070 == * left end position: ** 84644 * transcription direction: ** NEGATIVE * right end position: ** 89911 * centisome position: ** 1.641526...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIB5PISOM-RXN RIB5PISOM-RXN] ==
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== Gene Ec-20_000070 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 84644
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* common name:
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* transcription direction:
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** Ribose 5-phosphate isomerase, type A
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/5.3.1.6 EC-5.3.1.6]
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** 89911
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* centisome position:
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** 1.6415262   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0058_0136
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** Esi0058_0136
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** ARD
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[R147-RXN]]
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** 1 [[RIBOSE-5P]][c] '''<=>''' 1 [[RIBULOSE-5P]][c]
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* With common name(s):
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** 1 D-ribose 5-phosphate[c] '''<=>''' 1 D-ribulose 5-phosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-08_003540]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[P124-PWY]], Bifidobacterium shunt: [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY]
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** '''12''' reactions found over '''15''' reactions in the full pathway
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* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
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** '''13''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-5723]], Rubisco shunt: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-1861]], formaldehyde assimilation II (RuMP Cycle): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1861 PWY-1861]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[P185-PWY]], formaldehyde assimilation III (dihydroxyacetone cycle): [http://metacyc.org/META/NEW-IMAGE?object=P185-PWY P185-PWY]
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** '''11''' reactions found over '''12''' reactions in the full pathway
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* [[NONOXIPENT-PWY]], pentose phosphate pathway (non-oxidative branch): [http://metacyc.org/META/NEW-IMAGE?object=NONOXIPENT-PWY NONOXIPENT-PWY]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-4361]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=84644}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14657 14657]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=89911}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01056 R01056]
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{{#set: centisome position=1.6415262    }}
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* UNIPROT:
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{{#set: common name=Esi_0058_0136|Esi0058_0136|ARD}}
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** [http://www.uniprot.org/uniprot/P0A7Z0 P0A7Z0]
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{{#set: reaction associated=R147-RXN}}
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** [http://www.uniprot.org/uniprot/Q9CDI7 Q9CDI7]
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{{#set: pathway associated=PWY-4361}}
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** [http://www.uniprot.org/uniprot/P44725 P44725]
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** [http://www.uniprot.org/uniprot/Q58998 Q58998]
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** [http://www.uniprot.org/uniprot/Q9JTM5 Q9JTM5]
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** [http://www.uniprot.org/uniprot/Q9PP08 Q9PP08]
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** [http://www.uniprot.org/uniprot/P37351 P37351]
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** [http://www.uniprot.org/uniprot/P74234 P74234]
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** [http://www.uniprot.org/uniprot/Q55766 Q55766]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Ribose 5-phosphate isomerase, type A}}
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{{#set: ec number=EC-5.3.1.6}}
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{{#set: gene associated=Ec-08_003540}}
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{{#set: in pathway=P124-PWY|CALVIN-PWY|PWY-5723|PWY-1861|P185-PWY|NONOXIPENT-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:19, 21 March 2018

Gene Ec-20_000070

  • left end position:
    • 84644
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 89911
  • centisome position:
    • 1.6415262
  • Synonym(s):
    • Esi_0058_0136
    • Esi0058_0136
    • ARD

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-20_000070&oldid=26052"