Difference between revisions of "RXN-7873"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7494 PWY-7494] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7873 RXN-7873] == * direction: ** REVERSIBLE * common name: ** Alpha-1,3-mannosyl-glycoprotein...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7494 PWY-7494] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7873 RXN-7873] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** REVERSIBLE
 
* common name:
 
* common name:
** choline degradation IV
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** Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase, family GT54
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* ec number:
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** [http://enzyme.expasy.org/EC/2.4.1.145 EC-2.4.1.145]
 
* Synonym(s):
 
* Synonym(s):
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** IV
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** N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase
  
== Reaction(s) found ==
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== Reaction Formula ==
'''2''' reactions found over '''4''' reactions in the full pathway
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* With identifiers:
* [[BADH-RXN]]
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** 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''+''' 1 [[GLUCOSAMINYL-ETCETERA-MANNOSYL-R]][c] '''<=>''' 1 [[GLUCOSAMINYL-14-ETCETERA-MANNOSYL-R]][c] '''+''' 1 [[UDP]][c] '''+''' 1 [[PROTON]][c]
** 1 associated gene(s):
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* With common name(s):
*** [[Ec-20_003790]]
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** 1 UDP-N-acetyl-&alpha;-D-glucosamine[c] '''+''' 1 (N-acetyl-&beta;-D-glucosaminyl-1,2)-&alpha;-D-mannosyl-1,3-(&beta;-N-acetyl-D-glucosaminyl-1,2-&alpha;-D-mannosyl-1,6)-&beta;-D-mannosyl-R[c] '''<=>''' 1 N-acetyl-&beta;-D-glucosaminyl-1,4-(N-acetyl-D-glucosaminyl-1,2)-&alpha;-D-mannosyl-1,3-(&beta;-N-acetyl-D-glucosaminyl-1,2-&alpha;-D-mannosyl-1,6)-&beta;-D-mannosyl-R[c] '''+''' 1 UDP[c] '''+''' 1 H+[c]
** 1 reconstruction source(s) associated:
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*** [[orthology-aragem]]
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== Genes associated with this reaction  ==
* [[RXN-6268]]
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Genes have been associated with this reaction based on different elements listed below.
** 0 associated gene:
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* Gene: [[Ec-07_006930]]
** 1 reconstruction source(s) associated:
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** Source: [[annotation-esiliculosus_genome]]
*** [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
== Reaction(s) not found ==
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== Pathways  ==
* [http://metacyc.org/META/NEW-IMAGE?object=PWY-3721 PWY-3721]
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== Reconstruction information  ==
* [http://metacyc.org/META/NEW-IMAGE?object=PWY-3721 PWY-3721]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-4751}}
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{{#set: direction=REVERSIBLE}}
{{#set: common name=choline degradation IV}}
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{{#set: common name=Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase, family GT54}}
{{#set: reaction found=2}}
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{{#set: ec number=EC-2.4.1.145}}
{{#set: total reaction=4}}
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{{#set: common name=IV|N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase}}
{{#set: completion rate=50.0}}
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{{#set: gene associated=Ec-07_006930}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:19, 21 March 2018

Reaction RXN-7873

  • direction:
    • REVERSIBLE
  • common name:
    • Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase, family GT54
  • ec number:
  • Synonym(s):
    • IV
    • N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 UDP-N-acetyl-α-D-glucosamine[c] + 1 (N-acetyl-β-D-glucosaminyl-1,2)-α-D-mannosyl-1,3-(β-N-acetyl-D-glucosaminyl-1,2-α-D-mannosyl-1,6)-β-D-mannosyl-R[c] <=> 1 N-acetyl-β-D-glucosaminyl-1,4-(N-acetyl-D-glucosaminyl-1,2)-α-D-mannosyl-1,3-(β-N-acetyl-D-glucosaminyl-1,2-α-D-mannosyl-1,6)-β-D-mannosyl-R[c] + 1 UDP[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links