Difference between revisions of "Ec-01 006080"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7741 RXN-7741] == * direction: ** LEFT-TO-RIGHT * common name: ** Red chlorophyll catabolite re...")
 
(Created page with "Category:Gene == Gene Ec-01_006080 == * left end position: ** 5301428 * transcription direction: ** NEGATIVE * right end position: ** 5308041 * centisome position: ** 51.3...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7741 RXN-7741] ==
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== Gene Ec-01_006080 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5301428
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* common name:
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* transcription direction:
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** Red chlorophyll catabolite reductase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.3.7.12 EC-1.3.7.12]
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** 5308041
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* centisome position:
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** 51.37623   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0297_0005
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** Esi0297_0005
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DNA-DIRECTED-DNA-POLYMERASE-RXN]]
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** 2 [[Reduced-ferredoxins]][c] '''+''' 1 [[CPD-7063]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-7064]][c] '''+''' 2 [[Oxidized-ferredoxins]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 1 red chlorophyll catabolite[c] '''+''' 2 H+[c] '''=>''' 1 primary fluorescent chlorophyll catabolite[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-18_003740]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWY-5098]], chlorophyll a degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5098 PWY-5098]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6927]], chlorophyll a degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6927 PWY-6927]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=5301428}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24755 24755]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=5308041}}
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** [http://www.genome.jp/dbget-bin/www_bget?R09032 R09032]
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{{#set: centisome position=51.37623    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0297_0005|Esi0297_0005}}
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{{#set: common name=Red chlorophyll catabolite reductase}}
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{{#set: reaction associated=DNA-DIRECTED-DNA-POLYMERASE-RXN}}
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{{#set: ec number=EC-1.3.7.12}}
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{{#set: gene associated=Ec-18_003740}}
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{{#set: in pathway=PWY-5098|PWY-6927}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 20:19, 21 March 2018

Gene Ec-01_006080

  • left end position:
    • 5301428
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 5308041
  • centisome position:
    • 51.37623
  • Synonym(s):
    • Esi_0297_0005
    • Esi0297_0005

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-01_006080&oldid=26125"