Difference between revisions of "TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRIACYLGLYCEROL-LIPASE-RXN TRIACYLGLYCEROL-LIPASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN] == * direction: ** LEFT-TO-RIG...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRIACYLGLYCEROL-LIPASE-RXN TRIACYLGLYCEROL-LIPASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** triglyceride lipase
+
** pseudouridine synthase
−
** EsV-1-185
+
** Pseudouridine synthase I, TruA, C-terminal
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.1.3 EC-3.1.1.3]
+
** [http://enzyme.expasy.org/EC/5.4.99.12 EC-5.4.99.12]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Triacylglycerides]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Fatty-Acids]][c] '''+''' 1 [[1-2-Diglycerides]][c]
+
** 1 [[tRNA-uridine-38-40]][c] '''=>''' 1 [[tRNA-pseudouridine-38-40]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a triglyceride[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 a fatty acid[c] '''+''' 1 a 1,2-diglyceride[c]
+
** 1 a uridine38-40 in tRNA[c] '''=>''' 1 a pseudouridine38-40 in tRNA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-15_000230]]
+
* Gene: [[Ec-05_002890]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: GO-TERM
−
* [[Ec-24_003610]]
+
* Gene: [[Ec-22_001870]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: GO-TERM
−
* [[Ec-15_000020]]
+
* Gene: [[Ec-28_003620]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: GO-TERM
−
* [[Ec-23_002340]]
+
* Gene: [[Ec-14_000160]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: GO-TERM
−
* [[Ec-27_003400]]
+
* Gene: [[Ec-07_000310]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: GO-TERM
−
* [[Ec-15_000240]]
+
* Gene: [[Ec-27_004410]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: EC-NUMBER
−
* [[Ec-11_004280]]
+
* Gene: [[Ec-07_006750]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: GO-TERM
−
* [[Ec-23_002290]]
+
* Gene: [[Ec-26_004180]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: GO-TERM
−
* [[Ec-06_004240]]
+
* Gene: [[Ec-01_000690]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: GO-TERM
−
* [[Ec-06_005070]]
+
* Gene: [[Ec-27_005240]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: GO-TERM
−
* [[Ec-11_001230]]
+
* Gene: [[Ec-06_009680]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: GO-TERM
−
* [[Ec-06_003310]]
+
* Gene: [[Ec-09_003890]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: GO-TERM
−
* [[Ec-23_002330]]
+
* Gene: [[Ec-14_001350]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: GO-TERM
−
* [[Ec-15_000160]]
+
* Gene: [[Ec-08_003150]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: GO-TERM
−
* [[Ec-21_004100]]
+
* Gene: [[Ec-14_001540]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: GO-TERM
−
* [[Ec-02_001660]]
+
* Gene: [[Ec-14_001340]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: GO-TERM
−
* [[Ec-15_000190]]
+
* Gene: [[Ec-06_003220]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: GO-TERM
−
* [[Ec-16_003710]]
+
* Gene: [[Ec-20_000700]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: GO-TERM
−
* [[Ec-16_000950]]
+
* Gene: [[Ec-04_001540]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: GO-TERM
 +
* Gene: [[Ec-06_004490]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-17_003530]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-21_005910]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-20_003420]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-19_003680]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-01_008790]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[LIPAS-PWY]], triacylglycerol degradation: [http://metacyc.org/META/NEW-IMAGE?object=LIPAS-PWY LIPAS-PWY]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01369 R01369]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03020 R03020]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P10335 P10335]
+
** [http://www.uniprot.org/uniprot/Q59069 Q59069]
−
** [http://www.uniprot.org/uniprot/P07867 P07867]
+
** [http://www.uniprot.org/uniprot/P47428 P47428]
−
** [http://www.uniprot.org/uniprot/P11150 P11150]
+
** [http://www.uniprot.org/uniprot/P45291 P45291]
−
** [http://www.uniprot.org/uniprot/P17892 P17892]
+
** [http://www.uniprot.org/uniprot/Q45557 Q45557]
−
** [http://www.uniprot.org/uniprot/P24484 P24484]
+
** [http://www.uniprot.org/uniprot/Q50291 Q50291]
−
** [http://www.uniprot.org/uniprot/Q9TSB3 Q9TSB3]
+
** [http://www.uniprot.org/uniprot/P53167 P53167]
−
** [http://www.uniprot.org/uniprot/P40601 P40601]
+
** [http://www.uniprot.org/uniprot/Q12211 Q12211]
−
** [http://www.uniprot.org/uniprot/P0C0R3 P0C0R3]
+
** [http://www.uniprot.org/uniprot/P73295 P73295]
−
** [http://www.uniprot.org/uniprot/Q05489 Q05489]
+
** [http://www.uniprot.org/uniprot/P07649 P07649]
−
** [http://www.uniprot.org/uniprot/P81139 P81139]
+
−
** [http://www.uniprot.org/uniprot/P17573 P17573]
+
−
** [http://www.uniprot.org/uniprot/P16233 P16233]
+
−
** [http://www.uniprot.org/uniprot/Q64425 Q64425]
+
−
** [http://www.uniprot.org/uniprot/Q29458 Q29458]
+
−
** [http://www.uniprot.org/uniprot/Q59537 Q59537]
+
−
** [http://www.uniprot.org/uniprot/Q59538 Q59538]
+
−
** [http://www.uniprot.org/uniprot/Q59539 Q59539]
+
−
** [http://www.uniprot.org/uniprot/P32947 P32947]
+
−
** [http://www.uniprot.org/uniprot/P32948 P32948]
+
−
** [http://www.uniprot.org/uniprot/P32949 P32949]
+
−
** [http://www.uniprot.org/uniprot/P26504 P26504]
+
−
** [http://www.uniprot.org/uniprot/P61872 P61872]
+
−
** [http://www.uniprot.org/uniprot/Q59932 Q59932]
+
−
** [http://www.uniprot.org/uniprot/P61871 P61871]
+
−
** [http://www.uniprot.org/uniprot/O66015 O66015]
+
−
** [http://www.uniprot.org/uniprot/Q02351 Q02351]
+
−
** [http://www.uniprot.org/uniprot/P06857 P06857]
+
−
** [http://www.uniprot.org/uniprot/P04634 P04634]
+
−
** [http://www.uniprot.org/uniprot/P22394 P22394]
+
−
** [http://www.uniprot.org/uniprot/P29605 P29605]
+
−
** [http://www.uniprot.org/uniprot/P16386 P16386]
+
−
** [http://www.uniprot.org/uniprot/P08658 P08658]
+
−
** [http://www.uniprot.org/uniprot/P07098 P07098]
+
−
** [http://www.uniprot.org/uniprot/Q9UP41 Q9UP41]
+
−
** [http://www.uniprot.org/uniprot/P24640 P24640]
+
−
** [http://www.uniprot.org/uniprot/Q8VC44 Q8VC44]
+
−
** [http://www.uniprot.org/uniprot/P54316 P54316]
+
−
** [http://www.uniprot.org/uniprot/P29183 P29183]
+
−
** [http://www.uniprot.org/uniprot/P20261 P20261]
+
−
** [http://www.uniprot.org/uniprot/Q28681 Q28681]
+
−
** [http://www.uniprot.org/uniprot/P26876 P26876]
+
−
** [http://www.uniprot.org/uniprot/P32946 P32946]
+
−
** [http://www.uniprot.org/uniprot/P34163 P34163]
+
−
** [http://www.uniprot.org/uniprot/P50903 P50903]
+
−
** [http://www.uniprot.org/uniprot/P41365 P41365]
+
−
** [http://www.uniprot.org/uniprot/Q02104 Q02104]
+
−
** [http://www.uniprot.org/uniprot/Q12616 Q12616]
+
−
** [http://www.uniprot.org/uniprot/Q12614 Q12614]
+
−
** [http://www.uniprot.org/uniprot/Q59811 Q59811]
+
−
** [http://www.uniprot.org/uniprot/P75268 P75268]
+
−
** [http://www.uniprot.org/uniprot/Q48992 Q48992]
+
−
** [http://www.uniprot.org/uniprot/P78898 P78898]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=triglyceride lipase}}
+
{{#set: common name=pseudouridine synthase}}
−
{{#set: common name=EsV-1-185}}
+
{{#set: common name=Pseudouridine synthase I, TruA, C-terminal}}
−
{{#set: ec number=EC-3.1.1.3}}
+
{{#set: ec number=EC-5.4.99.12}}
−
{{#set: gene associated=Ec-15_000230|Ec-24_003610|Ec-15_000020|Ec-23_002340|Ec-27_003400|Ec-15_000240|Ec-11_004280|Ec-23_002290|Ec-06_004240|Ec-06_005070|Ec-11_001230|Ec-06_003310|Ec-23_002330|Ec-15_000160|Ec-21_004100|Ec-02_001660|Ec-15_000190|Ec-16_003710|Ec-16_000950}}
+
{{#set: gene associated=Ec-05_002890|Ec-22_001870|Ec-28_003620|Ec-14_000160|Ec-07_000310|Ec-27_004410|Ec-07_006750|Ec-26_004180|Ec-01_000690|Ec-27_005240|Ec-06_009680|Ec-09_003890|Ec-14_001350|Ec-08_003150|Ec-14_001540|Ec-14_001340|Ec-06_003220|Ec-20_000700|Ec-04_001540|Ec-06_004490|Ec-17_003530|Ec-21_005910|Ec-20_003420|Ec-19_003680|Ec-01_008790}}
−
{{#set: in pathway=LIPAS-PWY}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 20:20, 21 March 2018

Reaction TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • pseudouridine synthase
    • Pseudouridine synthase I, TruA, C-terminal
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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