Difference between revisions of "RXN0-1134"

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(Created page with "Category:Gene == Gene Ec-12_005100 == * left end position: ** 4698506 * transcription direction: ** NEGATIVE * right end position: ** 4701139 * centisome position: ** 56.3...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1134 RXN0-1134] == * direction: ** LEFT-TO-RIGHT * common name: ** Transketolase, C-terminal/P...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-12_005100 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1134 RXN0-1134] ==
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* left end position:
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* direction:
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** 4698506
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
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* right end position:
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* ec number:
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** 4701139
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** [http://enzyme.expasy.org/EC/1.2.4.1 EC-1.2.4.1]
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* centisome position:
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** 56.363686   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0287_0029
 
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** Esi0287_0029
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[PYRUVATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pyruvate-dehydrogenase-lipoate]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[Pyruvate-dehydrogenase-acetylDHlipoyl]][c]
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***ec-number
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* With common name(s):
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== Pathways associated ==
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** 1 pyruvate[c] '''+''' 1 H+[c] '''+''' 1 a [pyruvate dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''=>''' 1 CO2[c] '''+''' 1 a [pyruvate dehydrogenase E2 protein] N6-S-acetyldihydrolipoyl-L-lysine[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-18_003420]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-23_002710]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways ==
 +
* [[PYRUVDEHYD-PWY]], pyruvate decarboxylation to acetyl CoA: [http://metacyc.org/META/NEW-IMAGE?object=PYRUVDEHYD-PWY PYRUVDEHYD-PWY]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=4698506}}
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* LIGAND-RXN:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01699 R01699]
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{{#set: right end position=4701139}}
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* UNIPROT:
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{{#set: centisome position=56.363686    }}
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** [http://www.uniprot.org/uniprot/P06959 P06959]
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{{#set: common name=Esi_0287_0029|Esi0287_0029}}
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** [http://www.uniprot.org/uniprot/P26267 P26267]
−
{{#set: reaction associated=PEPTIDYLPROLYL-ISOMERASE-RXN}}
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** [http://www.uniprot.org/uniprot/P35485 P35485]
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** [http://www.uniprot.org/uniprot/Q59097 Q59097]
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** [http://www.uniprot.org/uniprot/Q9N1X8 Q9N1X8]
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** [http://www.uniprot.org/uniprot/P45119 P45119]
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** [http://www.uniprot.org/uniprot/P11966 P11966]
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** [http://www.uniprot.org/uniprot/P35488 P35488]
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** [http://www.uniprot.org/uniprot/P47515 P47515]
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** [http://www.uniprot.org/uniprot/P21882 P21882]
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** [http://www.uniprot.org/uniprot/P47516 P47516]
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** [http://www.uniprot.org/uniprot/P21881 P21881]
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** [http://www.uniprot.org/uniprot/P21873 P21873]
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** [http://www.uniprot.org/uniprot/P16387 P16387]
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** [http://www.uniprot.org/uniprot/P0AFG8 P0AFG8]
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** [http://www.uniprot.org/uniprot/P08559 P08559]
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** [http://www.uniprot.org/uniprot/P11177 P11177]
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** [http://www.uniprot.org/uniprot/P29803 P29803]
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** [http://www.uniprot.org/uniprot/P29804 P29804]
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** [http://www.uniprot.org/uniprot/P26284 P26284]
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** [http://www.uniprot.org/uniprot/Q9JU08 Q9JU08]
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** [http://www.uniprot.org/uniprot/Q9CJD6 Q9CJD6]
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** [http://www.uniprot.org/uniprot/Q9JU07 Q9JU07]
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** [http://www.uniprot.org/uniprot/Q9CJD5 Q9CJD5]
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** [http://www.uniprot.org/uniprot/Q09171 Q09171]
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** [http://www.uniprot.org/uniprot/P52901 P52901]
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** [http://www.uniprot.org/uniprot/P79931 P79931]
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** [http://www.uniprot.org/uniprot/P79932 P79932]
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** [http://www.uniprot.org/uniprot/Q9D051 Q9D051]
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** [http://www.uniprot.org/uniprot/P10801 P10801]
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** [http://www.uniprot.org/uniprot/P21874 P21874]
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** [http://www.uniprot.org/uniprot/P49432 P49432]
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** [http://www.uniprot.org/uniprot/Q59820 Q59820]
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** [http://www.uniprot.org/uniprot/P35486 P35486]
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** [http://www.uniprot.org/uniprot/P35487 P35487]
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** [http://www.uniprot.org/uniprot/Q06437 Q06437]
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** [http://www.uniprot.org/uniprot/P32473 P32473]
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** [http://www.uniprot.org/uniprot/Q59107 Q59107]
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** [http://www.uniprot.org/uniprot/P73405 P73405]
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** [http://www.uniprot.org/uniprot/Q49109 Q49109]
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** [http://www.uniprot.org/uniprot/O48685 O48685]
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** [http://www.uniprot.org/uniprot/P52902 P52902]
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** [http://www.uniprot.org/uniprot/P52904 P52904]
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** [http://www.uniprot.org/uniprot/P52903 P52903]
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** [http://www.uniprot.org/uniprot/O66112 O66112]
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** [http://www.uniprot.org/uniprot/Q9Y8I5 Q9Y8I5]
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** [http://www.uniprot.org/uniprot/Q9Y8I6 Q9Y8I6]
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** [http://www.uniprot.org/uniprot/O69478 O69478]
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** [http://www.uniprot.org/uniprot/P10802 P10802]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II}}
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{{#set: ec number=EC-1.2.4.1}}
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{{#set: gene associated=Ec-18_003420|Ec-23_002710}}
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{{#set: in pathway=PYRUVDEHYD-PWY}}
 +
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:20, 21 March 2018

Reaction RXN0-1134

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN0-1134&oldid=26205"