Difference between revisions of "P23-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16558 RXN-16558] == * direction: ** LEFT-TO-RIGHT * common name: ** Beta-hydroxydecanoyl thiol...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P23-PWY P23-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3052 TAX-3052...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16558 RXN-16558] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P23-PWY P23-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3052 TAX-3052]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-68336 TAX-68336]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200783 TAX-200783]
 
* common name:
 
* common name:
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** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
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** reductive TCA cycle I
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** ClpP/crotonase-like domain
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** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
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* ec number:
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
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* Synonym(s):
 
* Synonym(s):
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** reductive tricarboxylic acid cycle
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** reductive tricarboxylic acid pathway
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** reductive citric acid cycle
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** reverse citric acid cycle
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** carbon fixation
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** CO2 fixation
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** reductive carboxylic acid cycle
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''10''' reactions found over '''12''' reactions in the full pathway
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** 1 [[WATER]][c] '''+''' 1 [[CPD-17813]][c] '''=>''' 1 [[CPD-17814]][c]
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* [[ACONITATEDEHYDR-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 H2O[c] '''+''' 1 (2E,11Z)-hexadec-2,11-dienoyl-CoA[c] '''=>''' 1 (11Z)-(S)-3-hydroxyhexadec-11-enoyl-CoA[c]
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*** [[Ec-16_001000]]
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*** [[Ec-12_000170]]
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== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-esiliculosus_genome]]
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* [[Ec-16_003560]]
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* [[ACONITATEHYDR-RXN]]
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** ESILICULOSUS_GENOME
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** 2 associated gene(s):
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***EC-NUMBER
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*** [[Ec-16_001000]]
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* [[Ec-06_001380]]
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*** [[Ec-12_000170]]
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** ESILICULOSUS_GENOME
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** 1 reconstruction source(s) associated:
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***EC-NUMBER
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*** [[annotation-esiliculosus_genome]]
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* [[Ec-16_001250]]
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* [[ATP-CITRATE-PRO-S--LYASE-RXN]]
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** ESILICULOSUS_GENOME
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** 1 associated gene(s):
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***EC-NUMBER
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*** [[Ec-06_008380]]
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* [[Ec-14_006530]]
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** 1 reconstruction source(s) associated:
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** ESILICULOSUS_GENOME
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*** [[orthology-aragem]]
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***AUTOMATED-NAME-MATCH
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* [[FUMHYDR-RXN]]
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== Pathways  ==
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** 2 associated gene(s):
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* [[PWY-7656]], Spodoptera littoralis pheromone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7656 PWY-7656]
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*** [[Ec-25_001360]]
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** '''4''' reactions found over '''22''' reactions in the full pathway
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*** [[Ec-23_003460]]
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== Reconstruction information  ==
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** 2 reconstruction source(s) associated:
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* Category: [[annotation]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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*** Tool: [[pathwaytools]]
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* [[ISOCITDEH-RXN]]
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** 1 associated gene(s):
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*** [[Ec-11_003080]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[MALATE-DEH-RXN]]
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** 2 associated gene(s):
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*** [[Ec-10_006200]]
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*** [[Ec-02_003100]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[PEPCARBOX-RXN]]
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** 1 associated gene(s):
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*** [[Ec-28_003470]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[PEPSYNTH-RXN]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[PYRUFLAVREDUCT-RXN]]
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** 3 associated gene(s):
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*** [[Ec-18_003420]]
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*** [[Ec-15_004230]]
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*** [[Ec-23_002710]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[SUCCCOASYN-RXN]]
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** 2 associated gene(s):
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*** [[Ec-10_000030]]
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*** [[Ec-02_001020]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2-OXOGLUTARATE-SYNTHASE-RXN 2-OXOGLUTARATE-SYNTHASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-3052}}
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{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
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{{#set: taxonomic range=TAX-1224}}
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{{#set: common name=ClpP/crotonase-like domain}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
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{{#set: taxonomic range=TAX-68336}}
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{{#set: ec number=EC-4.2.1.17}}
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{{#set: taxonomic range=TAX-200783}}
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{{#set: gene associated=Ec-16_003560|Ec-06_001380|Ec-16_001250|Ec-14_006530}}
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{{#set: common name=reductive TCA cycle I}}
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{{#set: in pathway=PWY-7656}}
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{{#set: common name=reductive tricarboxylic acid cycle|reductive tricarboxylic acid pathway|reductive citric acid cycle|reverse citric acid cycle|carbon fixation|CO2 fixation|reductive carboxylic acid cycle}}
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{{#set: reconstruction category=annotation}}
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{{#set: reaction found=10}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: total reaction=12}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: completion rate=83.0}}

Latest revision as of 19:20, 21 March 2018

Pathway P23-PWY

  • taxonomic range:
  • common name:
    • reductive TCA cycle I
  • Synonym(s):
    • reductive tricarboxylic acid cycle
    • reductive tricarboxylic acid pathway
    • reductive citric acid cycle
    • reverse citric acid cycle
    • carbon fixation
    • CO2 fixation
    • reductive carboxylic acid cycle

Reaction(s) found

10 reactions found over 12 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=P23-PWY&oldid=26246"