Difference between revisions of "XMPXAN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.271-RXN 1.1.1.271-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=XMPXAN-RXN XMPXAN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 5'-nucleotidase * ec numb...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.271-RXN 1.1.1.271-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=XMPXAN-RXN XMPXAN-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** 5'-nucleotidase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.271 EC-1.1.1.271]
+
** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NADPH]][c] '''+''' 1 [[GDP-4-DEHYDRO-6-DEOXY-D-MANNOSE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CPD-13118]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[XANTHOSINE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NADPH[c] '''+''' 1 GDP-4-dehydro-6-deoxy-α-D-mannose[c] '''+''' 1 H+[c] '''=>''' 1 NADP+[c] '''+''' 1 GDP-β-L-fucose[c]
+
** 1 H2O[c] '''+''' 1 XMP[c] '''=>''' 1 phosphate[c] '''+''' 1 xanthosine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-01_003130]]
+
* Gene: [[Ec-05_000950]]
−
** [[pantograph]]-[[aragem]]
+
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-15_000820]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-12_005060]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-66]], GDP-L-fucose biosynthesis I (from GDP-D-mannose): [http://metacyc.org/META/NEW-IMAGE?object=PWY-66 PWY-66]
+
* [[PWY-5695]], urate biosynthesis/inosine 5'-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5695 PWY-5695]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[annotation]]
−
** Source: [[orthology-aragem]]
+
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pantograph]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18885 18885]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28530 28530]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05692 R05692]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02719 R02719]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-1.1.1.271}}
+
{{#set: common name=5'-nucleotidase}}
−
{{#set: gene associated=Ec-01_003130}}
+
{{#set: ec number=EC-3.1.3.5}}
−
{{#set: in pathway=PWY-66}}
+
{{#set: gene associated=Ec-05_000950|Ec-15_000820|Ec-12_005060}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=PWY-5695|PWY-6596}}
−
{{#set: reconstruction source=orthology-aragem}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:21, 21 March 2018

Reaction XMPXAN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 5'-nucleotidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5695, urate biosynthesis/inosine 5'-phosphate degradation: PWY-5695
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6596, adenosine nucleotides degradation I: PWY-6596
    • 6 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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