Difference between revisions of "RXN-14223"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PANTOATE-BETA-ALANINE-LIG-RXN PANTOATE-BETA-ALANINE-LIG-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14223 RXN-14223] == * direction: ** REVERSIBLE * common name: ** ribokinase * ec number: ** [ht...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PANTOATE-BETA-ALANINE-LIG-RXN PANTOATE-BETA-ALANINE-LIG-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14223 RXN-14223] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** pantoate-beta-alanine ligase
+
** ribokinase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.3.2.1 EC-6.3.2.1]
+
** [http://enzyme.expasy.org/EC/2.7.1.15 EC-2.7.1.15]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[L-PANTOATE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[B-ALANINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[PANTOTHENATE]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[2-DEOXYRIBOSE]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[DEOXY-RIBOSE-5P]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (R)-pantoate[c] '''+''' 1 ATP[c] '''+''' 1 &beta;-alanine[c] '''=>''' 1 H+[c] '''+''' 1 (R)-pantothenate[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
+
** 1 2'-deoxyribose[c] '''+''' 1 ATP[c] '''<=>''' 1 2-deoxy-D-ribose 5-phosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-12_004720]]
+
* Gene: [[Ec-07_005840]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: GO-TERM
−
** [[pantograph]]-[[aragem]]
+
* Gene: [[Ec-01_005220]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[PANTO-PWY]], phosphopantothenate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PANTO-PWY PANTO-PWY]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[aragem]]
+
*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10912 10912]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30874 30874]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02473 R02473]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02750 R02750]
−
* UNIPROT:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/P31663 P31663]
+
{{#set: common name=ribokinase}}
−
** [http://www.uniprot.org/uniprot/Q9PIK2 Q9PIK2]
+
{{#set: ec number=EC-2.7.1.15}}
−
** [http://www.uniprot.org/uniprot/P56061 P56061]
+
{{#set: gene associated=Ec-07_005840|Ec-01_005220}}
−
** [http://www.uniprot.org/uniprot/P57035 P57035]
+
{{#set: in pathway=}}
−
** [http://www.uniprot.org/uniprot/Q9ZN52 Q9ZN52]
+
−
** [http://www.uniprot.org/uniprot/Q09673 Q09673]
+
−
** [http://www.uniprot.org/uniprot/O24210 O24210]
+
−
** [http://www.uniprot.org/uniprot/Q9X713 Q9X713]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=pantoate-beta-alanine ligase}}
+
−
{{#set: ec number=EC-6.3.2.1}}
+
−
{{#set: gene associated=Ec-12_004720}}
+
−
{{#set: in pathway=PANTO-PWY}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=aragem}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 19:21, 21 March 2018

Reaction RXN-14223

  • direction:
    • REVERSIBLE
  • common name:
    • ribokinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 2'-deoxyribose[c] + 1 ATP[c] <=> 1 2-deoxy-D-ribose 5-phosphate[c] + 1 ADP[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-14223&oldid=26359"