Difference between revisions of "PWY-5109"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13442 RXN-13442] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5109 PWY-5109] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-3...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13442 RXN-13442] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5109 PWY-5109] ==
* direction:
+
* taxonomic range:
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
* ec number:
+
* common name:
** [http://enzyme.expasy.org/EC/2.3.1 EC-2.3.1]
+
** 2-methylbutanoate biosynthesis
 
* Synonym(s):
 
* Synonym(s):
 +
** 2-methylbutyrate biosynthesis
  
== Reaction Formula ==
+
== Reaction(s) found ==
* With identifiers:
+
'''4''' reactions found over '''6''' reactions in the full pathway
** 1 [[CPD-14018]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-14423]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* [[1.1.1.178-RXN]]
* With common name(s):
+
** 0 associated gene:
** 1 icosapentaenoyl-CoA[c] '''+''' 1 malonyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 3-oxo-docosapentaenoyl-CoA[c] '''+''' 1 coenzyme A[c] '''+''' 1 CO2[c]
+
** 1 reconstruction source(s) associated:
 
+
*** [[annotation-esiliculosus_genome]]
== Genes associated with this reaction  ==
+
* [[2-METHYLACYL-COA-DEHYDROGENASE-RXN]]
== Pathways  ==
+
** 0 associated gene:
* [[PWY-7053]], docosahexaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7053 PWY-7053]
+
** 1 reconstruction source(s) associated:
** '''5''' reactions found over '''7''' reactions in the full pathway
+
*** [[annotation-esiliculosus_genome]]
* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
+
* [[METHYLACETOACETYLCOATHIOL-RXN]]
** '''14''' reactions found over '''14''' reactions in the full pathway
+
** 3 associated gene(s):
* [[PWY-7727]], docosahexaenoate biosynthesis IV (4-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7727 PWY-7727]
+
*** [[Ec-26_003940]]
** '''5''' reactions found over '''6''' reactions in the full pathway
+
*** [[Ec-22_002850]]
== Reconstruction information  ==
+
*** [[Ec-24_000870]]
* [[annotation]]:
+
** 2 reconstruction source(s) associated:
** [[pathwaytools]]:
+
*** [[annotation-esiliculosus_genome]]
*** [[esiliculosus_genome]]
+
*** [[orthology-aragem]]
 +
* [[TIGLYLCOA-HYDROXY-RXN]]
 +
** 5 associated gene(s):
 +
*** [[Ec-16_003560]]
 +
*** [[Ec-16_001250]]
 +
*** [[Ec-06_001380]]
 +
*** [[Ec-14_006530]]
 +
*** [[Ec-17_000320]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PROPIONATE-COA-TRANSFERASE-RXN PROPIONATE-COA-TRANSFERASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15031 RXN-15031]
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: taxonomic range=TAX-33208}}
{{#set: ec number=EC-2.3.1}}
+
{{#set: common name=2-methylbutanoate biosynthesis}}
{{#set: in pathway=PWY-7053|PWY-7606|PWY-7727}}
+
{{#set: common name=2-methylbutyrate biosynthesis}}
{{#set: reconstruction category=annotation}}
+
{{#set: reaction found=4}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: total reaction=6}}
{{#set: reconstruction source=esiliculosus_genome}}
+
{{#set: completion rate=67.0}}

Latest revision as of 19:21, 21 March 2018

Pathway PWY-5109

  • taxonomic range:
  • common name:
    • 2-methylbutanoate biosynthesis
  • Synonym(s):
    • 2-methylbutyrate biosynthesis

Reaction(s) found

4 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links