Difference between revisions of "PWY-3581"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12178 RXN-12178] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycosyl hydrolase, family...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3581 PWY-3581] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3440 TAX-34...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12178 RXN-12178] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3581 PWY-3581] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3440 TAX-3440]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3465 TAX-3465]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3455 TAX-3455]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3401 TAX-3401]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-41773 TAX-41773]
 
* common name:
 
* common name:
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** Glycosyl hydrolase, family 88
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** (S)-reticuline biosynthesis I
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* ec number:
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** [http://enzyme.expasy.org/EC/3.2.1.179 EC-3.2.1.179]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''11''' reactions in the full pathway
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** 1 [[CPD-36]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[N-acetyl-D-galactosamine]][c] '''+''' 1 [[CPD-13122]][c]
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* [[RXN-5861]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine[c] '''+''' 1 H2O[c] '''=>''' 1 N-acetyl-D-galactosamine[c] '''+''' 1 4-deoxy-L-threo-hex-4-enopyranuronate[c]
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*** [[Ec-12_008160]]
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*** [[Ec-03_003140]]
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== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-esiliculosus_genome]]
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* [[Ec-02_002980]]
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* [[TYROSINE-AMINOTRANSFERASE-RXN]]
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** ESILICULOSUS_GENOME
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** 0 associated gene:
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***AUTOMATED-NAME-MATCH
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** 1 reconstruction source(s) associated:
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* [[Ec-02_002970]]
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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** ESILICULOSUS_GENOME
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* [[TYROSINE-DECARBOXYLASE-RXN]]
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***AUTOMATED-NAME-MATCH
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** 1 associated gene(s):
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== Pathways  ==
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*** [[Ec-14_004250]]
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* [[PWY-7646]], dermatan sulfate degradation I (bacterial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7646 PWY-7646]
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** 1 reconstruction source(s) associated:
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** '''1''' reactions found over '''4''' reactions in the full pathway
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*** [[annotation-esiliculosus_genome]]
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* [[PWY-6572]], chondroitin sulfate degradation I (bacterial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6572 PWY-6572]
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== Reaction(s) not found ==
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=1.14.13.71-RXN 1.14.13.71-RXN]
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== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.116-RXN 2.1.1.116-RXN]
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* Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.128-RXN 2.1.1.128-RXN]
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.140-RXN 2.1.1.140-RXN]
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*** Tool: [[pathwaytools]]
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* [http://metacyc.org/META/NEW-IMAGE?object=4.1.1.80-RXN 4.1.1.80-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9978 RXN-9978]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-221 RXN66-221]
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* [http://metacyc.org/META/NEW-IMAGE?object=S-NORLAUDANOSOLINE-SYNTHASE-RXN S-NORLAUDANOSOLINE-SYNTHASE-RXN]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-3440}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31654 31654]
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{{#set: taxonomic range=TAX-3465}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-3455}}
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{{#set: common name=Glycosyl hydrolase, family 88}}
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{{#set: taxonomic range=TAX-3401}}
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{{#set: ec number=EC-3.2.1.179}}
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{{#set: taxonomic range=TAX-41773}}
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{{#set: gene associated=Ec-02_002980|Ec-02_002970}}
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{{#set: common name=(S)-reticuline biosynthesis I}}
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{{#set: in pathway=PWY-7646|PWY-6572}}
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{{#set: reaction found=3}}
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{{#set: reconstruction category=annotation}}
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{{#set: total reaction=11}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: completion rate=27.0}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:22, 21 March 2018

Pathway PWY-3581

Reaction(s) found

3 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-3581&oldid=26456"