Difference between revisions of "Ec-06 008640"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12178 RXN-12178] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycosyl hydrolase, family...")
 
(Created page with "Category:Gene == Gene Ec-06_008640 == * left end position: ** 6312407 * transcription direction: ** POSITIVE * right end position: ** 6317573 * centisome position: ** 72.0...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12178 RXN-12178] ==
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== Gene Ec-06_008640 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 6312407
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* common name:
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* transcription direction:
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** Glycosyl hydrolase, family 88
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/3.2.1.179 EC-3.2.1.179]
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** 6317573
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* centisome position:
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** 72.07789   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0252_0001
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** Esi0252_0001
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PROTEIN-KINASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[CPD-36]][c] '''=>''' 1 [[N-acetyl-D-galactosamine]][c] '''+''' 1 [[CPD-13122]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 H2O[c] '''+''' 1 4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine[c] '''=>''' 1 N-acetyl-D-galactosamine[c] '''+''' 1 4-deoxy-L-threo-hex-4-enopyranuronate[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-02_002970]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-02_002980]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWY-7646]], dermatan sulfate degradation I (bacterial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7646 PWY-7646]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6572]], chondroitin sulfate degradation I (bacterial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6572 PWY-6572]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=6312407}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31654 31654]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=6317573}}
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{{#set: common name=Glycosyl hydrolase, family 88}}
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{{#set: centisome position=72.07789    }}
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{{#set: ec number=EC-3.2.1.179}}
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{{#set: common name=Esi_0252_0001|Esi0252_0001}}
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{{#set: gene associated=Ec-02_002970|Ec-02_002980}}
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{{#set: reaction associated=PROTEIN-KINASE-RXN}}
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{{#set: in pathway=PWY-7646|PWY-6572}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:22, 21 March 2018

Gene Ec-06_008640

  • left end position:
    • 6312407
  • transcription direction:
    • POSITIVE
  • right end position:
    • 6317573
  • centisome position:
    • 72.07789
  • Synonym(s):
    • Esi_0252_0001
    • Esi0252_0001

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-06_008640&oldid=26463"