Difference between revisions of "DAPASYN-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=VALSYN-PWY VALSYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TA...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DAPASYN-RXN DAPASYN-RXN] == * direction: ** REVERSIBLE * common name: ** Bifunctional dethiobiotin...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=VALSYN-PWY VALSYN-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DAPASYN-RXN DAPASYN-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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* common name:
 
* common name:
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** L-valine biosynthesis
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** Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.6.1.62 EC-2.6.1.62]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''4''' reactions found over '''4''' reactions in the full pathway
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* With identifiers:
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* [[ACETOLACTREDUCTOISOM-RXN]]
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[8-AMINO-7-OXONONANOATE]][c] '''<=>''' 1 [[DIAMINONONANOATE]][c] '''+''' 1 [[S-ADENOSYL-4-METHYLTHIO-2-OXOBUTANOATE]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Ec-09_003170]]
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 8-amino-7-oxononanoate[c] '''<=>''' 1 7,8-diaminopelargonate[c] '''+''' 1 S-adenosyl-4-methylthio-2-oxobutanoate[c]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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* [[ACETOLACTSYN-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** 0 associated gene:
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* Gene: [[Ec-01_005750]]
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* [[BRANCHED-CHAINAMINOTRANSFERVAL-RXN]]
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** Source: [[orthology-aragem]]
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** 4 associated gene(s):
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== Pathways  ==
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*** [[Ec-12_005520]]
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* [[PWY0-1507]], biotin biosynthesis from 8-amino-7-oxononanoate I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1507 PWY0-1507]
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*** [[Ec-12_005530]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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*** [[Ec-20_001390]]
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== Reconstruction information  ==
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*** [[Ec-12_005560]]
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* Category: [[orthology]]
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** 1 reconstruction source(s) associated:
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** Source: [[orthology-aragem]]
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*** [[annotation-esiliculosus_genome]]
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*** Tool: [[pantograph]]
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* [[DIHYDROXYISOVALDEHYDRAT-RXN]]
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* Category: [[annotation]]
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** 1 associated gene(s):
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-03_000220]]
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*** Tool: [[pathwaytools]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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* ECOCYC:
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* RHEA:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=VALSYN-PWY VALSYN-PWY]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16861 16861]
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{{#set: taxonomic range=TAX-2157}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03231 R03231]
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{{#set: taxonomic range=TAX-2759}}
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* UNIPROT:
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{{#set: common name=L-valine biosynthesis}}
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** [http://www.uniprot.org/uniprot/Q58696 Q58696]
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{{#set: reaction found=4}}
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** [http://www.uniprot.org/uniprot/P53555 P53555]
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{{#set: total reaction=4}}
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** [http://www.uniprot.org/uniprot/P44426 P44426]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/Q9JV96 Q9JV96]
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** [http://www.uniprot.org/uniprot/Q9PIJ2 Q9PIJ2]
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** [http://www.uniprot.org/uniprot/P46395 P46395]
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** [http://www.uniprot.org/uniprot/P53656 P53656]
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** [http://www.uniprot.org/uniprot/P22805 P22805]
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** [http://www.uniprot.org/uniprot/P45488 P45488]
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** [http://www.uniprot.org/uniprot/P12995 P12995]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase}}
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{{#set: ec number=EC-2.6.1.62}}
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{{#set: gene associated=Ec-01_005750}}
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{{#set: in pathway=PWY0-1507}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:22, 21 March 2018

Reaction DAPASYN-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1507, biotin biosynthesis from 8-amino-7-oxononanoate I: PWY0-1507
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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