Difference between revisions of "CENTFERM-PWY"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=AMP AMP] == * smiles: ** C(C3(C(C(C(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O)O))OP([O-])([O-])=O * inchi...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=CENTFERM-PWY CENTFERM-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-122...")
 
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[[Category:Metabolite]]
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[[Category:Pathway]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=AMP AMP] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=CENTFERM-PWY CENTFERM-PWY] ==
* smiles:
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* taxonomic range:
** C(C3(C(C(C(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O)O))OP([O-])([O-])=O
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
* inchi key:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
** InChIKey=UDMBCSSLTHHNCD-KQYNXXCUSA-L
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* common name:
 
* common name:
** AMP
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** pyruvate fermentation to butanoate
* molecular weight:
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** 345.208   
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* Synonym(s):
 
* Synonym(s):
** 5'-AMP
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** central fermentation pathway
** adenosine-monophosphate
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** acetobutylicum fermentation
** adenylic acid
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** pyruvate fermentation to butyrate
** adenosine 5'-phosphate
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** adenosine 5'-monophosphate
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** adenylate
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** 5'-adenylic acid
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** 5'-adenosine monophosphate
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== Reaction(s) known to consume the compound ==
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== Reaction(s) found ==
* [[AMP-DEAMINASE-RXN]]
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'''4''' reactions found over '''7''' reactions in the full pathway
* [[ADENYL-KIN-RXN]]
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* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
* [[AMP-DEPHOSPHORYLATION-RXN]]
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** 3 associated gene(s):
== Reaction(s) known to produce the compound ==
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*** [[Ec-26_003940]]
* [[ARGININE--TRNA-LIGASE-RXN]]
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*** [[Ec-24_000870]]
* [[RXN66-483]]
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*** [[Ec-22_002850]]
* [[RXN66-480]]
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** 2 reconstruction source(s) associated:
* [[RXN0-7248]]
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*** [[annotation-esiliculosus_genome]]
* [[RXN66-484]]
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*** [[orthology-aragem]]
* [[GMP-SYN-GLUT-RXN]]
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* [[PYRUFLAVREDUCT-RXN]]
* [[ACYLCOASYN-RXN]]
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** 3 associated gene(s):
* [[ACETATE--COA-LIGASE-RXN]]
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*** [[Ec-18_003420]]
* [[RXN-1961]]
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*** [[Ec-15_004230]]
* [[ASPARTATE--TRNA-LIGASE-RXN]]
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*** [[Ec-23_002710]]
* [[RXN-13614]]
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** 1 reconstruction source(s) associated:
* [[R223-RXN]]
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*** [[annotation-esiliculosus_genome]]
* [[TRYPTOPHAN--TRNA-LIGASE-RXN]]
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* [[RXN-11662]]
* [[RXN-7904]]
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** 2 associated gene(s):
* [[RXN-16418]]
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*** [[Ec-19_005290]]
* [[6.1.1.24-RXN]]
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*** [[Ec-14_006530]]
* [[ASNSYNA-RXN]]
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** 2 reconstruction source(s) associated:
* [[DNA-LIGASE-ATP-RXN]]
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*** [[annotation-esiliculosus_genome]]
* [[LYSINE--TRNA-LIGASE-RXN]]
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*** [[orthology-aragem]]
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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* [[RXN-11667]]
* [[RXN-15733]]
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** 2 associated gene(s):
* [[RXN-16165]]
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*** [[Ec-17_000320]]
* [[RXN-9623]]
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*** [[Ec-14_006530]]
* [[4-COUMARATE--COA-LIGASE-RXN]]
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** 2 reconstruction source(s) associated:
* [[NAD-SYNTH-GLN-RXN]]
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*** [[annotation-esiliculosus_genome]]
* [[ASPARAGINE--TRNA-LIGASE-RXN]]
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*** [[orthology-aragem]]
* [[GLUTAMINE--TRNA-LIGASE-RXN]]
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== Reaction(s) not found ==
* [[6.3.4.10-RXN]]
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* [http://metacyc.org/META/NEW-IMAGE?object=BUTYRATE-KINASE-RXN BUTYRATE-KINASE-RXN]
* [[ARGSUCCINSYN-RXN]]
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* [http://metacyc.org/META/NEW-IMAGE?object=BUTYRYL-COA-DEHYDROGENASE-RXN BUTYRYL-COA-DEHYDROGENASE-RXN]
* [[RXN-2001]]
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* [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHATE-BUTYRYLTRANSFERASE-RXN PHOSPHATE-BUTYRYLTRANSFERASE-RXN]
* [[RXN0-1441]]
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* [[THREONINE--TRNA-LIGASE-RXN]]
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* [[H2PTERIDINEPYROPHOSPHOKIN-RXN]]
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* [[METHIONINE--TRNA-LIGASE-RXN]]
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* [[6.2.1.34-RXN]]
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* [[RXN-12978]]
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* [[ALANINE--TRNA-LIGASE-RXN]]
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* [[RXN0-7238]]
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* [[RXN0-7239]]
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* [[RXN-9386]]
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* [[RXN-9644]]
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* [[PROLINE--TRNA-LIGASE-RXN]]
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* [[NAD-SYNTH-NH3-RXN]]
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* [[RXN-8348]]
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* [[VALINE--TRNA-LIGASE-RXN]]
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* [[RXN-1126]]
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* [[PEPSYNTH-RXN]]
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* [[RXN0-2023]]
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* [[RXN-10919]]
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* [[RXN-12056]]
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* [[RXN66-477]]
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* [[HISTIDINE--TRNA-LIGASE-RXN]]
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* [[RXN66-474]]
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* [[RXN-12184]]
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* [[RXN-13290]]
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* [[RNA-LIGASE-ATP-RXN]]
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* [[TYROSINE--TRNA-LIGASE-RXN]]
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* [[RXN1G-121]]
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* [[RXN-16393]]
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* [[RXN-16389]]
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* [[ASNSYNB-RXN]]
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* [[TRANS-RXN0-623]]
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* [[ADENOSINE-KINASE-RXN]]
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* [[APYRASE-RXN]]
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* [[GTPPYPHOSKIN-RXN]]
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* [[GMP-SYN-NH3-RXN]]
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* [[RXN-16401]]
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* [[RXN-16402]]
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* [[GDPPYPHOSKIN-RXN]]
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* [[PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN]]
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* [[RXN66-469]]
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* [[SERINE--TRNA-LIGASE-RXN]]
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* [[LINOLENOYL-RXN]]
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* [[PANTOATE-BETA-ALANINE-LIG-RXN]]
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* [[RXN-17155]]
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* [[RXN-16380]]
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* [[RNA-3-PHOSPHATE-CYCLASE-RXN]]
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* [[THIAMIN-PYROPHOSPHOKINASE-RXN]]
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* [[ADENPRIBOSYLTRAN-RXN]]
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* [[RXN-9673]]
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* [[ACETOACETATE--COA-LIGASE-RXN]]
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* [[CYSTEINE--TRNA-LIGASE-RXN]]
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* [[6.3.4.11-RXN]]
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* [[LEUCINE--TRNA-LIGASE-RXN]]
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* [[RXN-14570]]
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* [[GLYCINE--TRNA-LIGASE-RXN]]
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* [[PHENYLALANINE--TRNA-LIGASE-RXN]]
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* [[RXN-10]]
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* [[ISOLEUCINE--TRNA-LIGASE-RXN]]
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* [[6.3.4.9-RXN]]
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* [[BIOTINLIG-RXN]]
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* [[RXN0-2161]]
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* [[RXN-12473]]
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* [[GLURS-RXN]]
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* [[2.7.9.3-RXN]]
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== Reaction(s) of unknown directionality ==
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* [[RXN-10862]]
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* [[ADENYLYLSULFATE-REDUCTASE-RXN]]
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* [[PRPPSYN-RXN]]
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* [[RXN-12502]]
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* [[RXN-12504]]
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* [[RXN-16415]]
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* [[AMPSYN-RXN]]
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== External links  ==
 
== External links  ==
* NCI:
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{{#set: taxonomic range=TAX-1224}}
** [http://cactus.nci.nih.gov/ncidb2.2/?nsc=20264 20264]
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{{#set: taxonomic range=TAX-1239}}
* CAS : 61-19-8
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{{#set: common name=pyruvate fermentation to butanoate}}
* BIGG : 33534
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{{#set: common name=central fermentation pathway|acetobutylicum fermentation|pyruvate fermentation to butyrate}}
* PUBCHEM:
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{{#set: reaction found=4}}
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=15938965 15938965]
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{{#set: total reaction=7}}
* HMDB : HMDB00045
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{{#set: completion rate=57.0}}
* LIGAND-CPD:
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** [http://www.genome.jp/dbget-bin/www_bget?C00020 C00020]
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* CHEMSPIDER:
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** [http://www.chemspider.com/Chemical-Structure.10239183.html 10239183]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=456215 456215]
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* METABOLIGHTS : MTBLC456215
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{{#set: smiles=C(C3(C(C(C(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O)O))OP([O-])([O-])=O}}
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{{#set: inchi key=InChIKey=UDMBCSSLTHHNCD-KQYNXXCUSA-L}}
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{{#set: common name=AMP}}
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{{#set: molecular weight=345.208    }}
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{{#set: common name=5'-AMP|adenosine-monophosphate|adenylic acid|adenosine 5'-phosphate|adenosine 5'-monophosphate|adenylate|5'-adenylic acid|5'-adenosine monophosphate}}
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{{#set: consumed by=AMP-DEAMINASE-RXN|ADENYL-KIN-RXN|AMP-DEPHOSPHORYLATION-RXN}}
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{{#set: produced by=ARGININE--TRNA-LIGASE-RXN|RXN66-483|RXN66-480|RXN0-7248|RXN66-484|GMP-SYN-GLUT-RXN|ACYLCOASYN-RXN|ACETATE--COA-LIGASE-RXN|RXN-1961|ASPARTATE--TRNA-LIGASE-RXN|RXN-13614|R223-RXN|TRYPTOPHAN--TRNA-LIGASE-RXN|RXN-7904|RXN-16418|6.1.1.24-RXN|ASNSYNA-RXN|DNA-LIGASE-ATP-RXN|LYSINE--TRNA-LIGASE-RXN|UBIQUITIN--PROTEIN-LIGASE-RXN|RXN-15733|RXN-16165|RXN-9623|4-COUMARATE--COA-LIGASE-RXN|NAD-SYNTH-GLN-RXN|ASPARAGINE--TRNA-LIGASE-RXN|GLUTAMINE--TRNA-LIGASE-RXN|6.3.4.10-RXN|ARGSUCCINSYN-RXN|RXN-2001|RXN0-1441|THREONINE--TRNA-LIGASE-RXN|H2PTERIDINEPYROPHOSPHOKIN-RXN|METHIONINE--TRNA-LIGASE-RXN|6.2.1.34-RXN|RXN-12978|ALANINE--TRNA-LIGASE-RXN|RXN0-7238|RXN0-7239|RXN-9386|RXN-9644|PROLINE--TRNA-LIGASE-RXN|NAD-SYNTH-NH3-RXN|RXN-8348|VALINE--TRNA-LIGASE-RXN|RXN-1126|PEPSYNTH-RXN|RXN0-2023|RXN-10919|RXN-12056|RXN66-477|HISTIDINE--TRNA-LIGASE-RXN|RXN66-474|RXN-12184|RXN-13290|RNA-LIGASE-ATP-RXN|TYROSINE--TRNA-LIGASE-RXN|RXN1G-121|RXN-16393|RXN-16389|ASNSYNB-RXN|TRANS-RXN0-623|ADENOSINE-KINASE-RXN|APYRASE-RXN|GTPPYPHOSKIN-RXN|GMP-SYN-NH3-RXN|RXN-16401|RXN-16402|GDPPYPHOSKIN-RXN|PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN|RXN66-469|SERINE--TRNA-LIGASE-RXN|LINOLENOYL-RXN|PANTOATE-BETA-ALANINE-LIG-RXN|RXN-17155|RXN-16380|RNA-3-PHOSPHATE-CYCLASE-RXN|THIAMIN-PYROPHOSPHOKINASE-RXN|ADENPRIBOSYLTRAN-RXN|RXN-9673|ACETOACETATE--COA-LIGASE-RXN|CYSTEINE--TRNA-LIGASE-RXN|6.3.4.11-RXN|LEUCINE--TRNA-LIGASE-RXN|RXN-14570|GLYCINE--TRNA-LIGASE-RXN|PHENYLALANINE--TRNA-LIGASE-RXN|RXN-10|ISOLEUCINE--TRNA-LIGASE-RXN|6.3.4.9-RXN|BIOTINLIG-RXN|RXN0-2161|RXN-12473|GLURS-RXN|2.7.9.3-RXN}}
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{{#set: reversible reaction associated=RXN-10862|ADENYLYLSULFATE-REDUCTASE-RXN|PRPPSYN-RXN|RXN-12502|RXN-12504|RXN-16415|AMPSYN-RXN}}
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Latest revision as of 19:23, 21 March 2018

Pathway CENTFERM-PWY

  • taxonomic range:
  • common name:
    • pyruvate fermentation to butanoate
  • Synonym(s):
    • central fermentation pathway
    • acetobutylicum fermentation
    • pyruvate fermentation to butyrate

Reaction(s) found

4 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links