Difference between revisions of "ENOYL-COA-HYDRAT-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLATE-REDUCTASE-RXN GLYCOLATE-REDUCTASE-RXN] == * direction: ** REVERSIBLE * ec number: ** [htt...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ENOYL-COA-HYDRAT-RXN ENOYL-COA-HYDRAT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ClpP/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLATE-REDUCTASE-RXN GLYCOLATE-REDUCTASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ENOYL-COA-HYDRAT-RXN ENOYL-COA-HYDRAT-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** ClpP/crotonase-like domain
 +
** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
 +
** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.26 EC-1.1.1.26]
+
** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NAD]][c] '''+''' 1 [[GLYCOLLATE]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[GLYOX]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[TRANS-D2-ENOYL-COA]][c] '''=>''' 1 [[L-3-HYDROXYACYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD+[c] '''+''' 1 glycolate[c] '''<=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 glyoxylate[c]
+
** 1 H2O[c] '''+''' 1 a trans-2-enoyl-CoA[c] '''=>''' 1 a (3S)-3-hydroxyacyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-14_006530]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-06_001380]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-16_003560]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-16_001250]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7295]], L-arabinose degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7295 PWY-7295]
+
* [[PWY-5136]], fatty acid &beta;-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
−
** '''3''' reactions found over '''8''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7294]], xylose degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7294 PWY-7294]
+
* [[PWY-7007]], methyl ketone biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7007 PWY-7007]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[FAO-PWY]], fatty acid &beta;-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5138]], unsaturated, even numbered fatty acid &beta;-oxidation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5138 PWY-5138]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY66-391]], fatty acid &beta;-oxidation VI (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[gap-filling]]:
+
* Category: [[annotation]]
−
** [[meneco]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[added for gapfilling]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18229 18229]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16105 16105]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00717 R00717]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02685 R02685]
−
{{#set: direction=REVERSIBLE}}
+
* PIR:
−
{{#set: ec number=EC-1.1.1.26}}
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T17476 T17476]
−
{{#set: in pathway=PWY-7295|PWY-7294}}
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T10464 T10464]
−
{{#set: reconstruction category=gap-filling}}
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S72706 S72706]
−
{{#set: reconstruction tool=meneco}}
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S57651 S57651]
−
{{#set: reconstruction source=added for gapfilling}}
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S54786 S54786]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S41006 S41006]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S36678 S36678]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S32607 S32607]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S06477 S06477]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JX0199 JX0199]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I40678 I40678]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I37195 I37195]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G69985 G69985]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=E70893 E70893]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DWRTEP DWRTEP]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D70893 D70893]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D64890 D64890]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C71435 C71435]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C69893 C69893]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C69370 C69370]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C69304 C69304]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A49613 A49613]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A39592 A39592]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P21177 P21177]
 +
** [http://www.uniprot.org/uniprot/Q08426 Q08426]
 +
** [http://www.uniprot.org/uniprot/O29814 O29814]
 +
** [http://www.uniprot.org/uniprot/O29299 O29299]
 +
** [http://www.uniprot.org/uniprot/O34893 O34893]
 +
** [http://www.uniprot.org/uniprot/O23520 O23520]
 +
** [http://www.uniprot.org/uniprot/P76082 P76082]
 +
** [http://www.uniprot.org/uniprot/P64016 P64016]
 +
** [http://www.uniprot.org/uniprot/P07896 P07896]
 +
** [http://www.uniprot.org/uniprot/O53419 O53419]
 +
** [http://www.uniprot.org/uniprot/P94549 P94549]
 +
** [http://www.uniprot.org/uniprot/Q13825 Q13825]
 +
** [http://www.uniprot.org/uniprot/P45361 P45361]
 +
** [http://www.uniprot.org/uniprot/P28793 P28793]
 +
** [http://www.uniprot.org/uniprot/P14604 P14604]
 +
** [http://www.uniprot.org/uniprot/P22414 P22414]
 +
** [http://www.uniprot.org/uniprot/Q7M0E0 Q7M0E0]
 +
** [http://www.uniprot.org/uniprot/P34559 P34559]
 +
** [http://www.uniprot.org/uniprot/Q01373 Q01373]
 +
** [http://www.uniprot.org/uniprot/P55100 P55100]
 +
** [http://www.uniprot.org/uniprot/P53526 P53526]
 +
** [http://www.uniprot.org/uniprot/Q39659 Q39659]
 +
** [http://www.uniprot.org/uniprot/O52797 O52797]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=ClpP/crotonase-like domain}}
 +
{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
 +
{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
 +
{{#set: ec number=EC-4.2.1.17}}
 +
{{#set: gene associated=Ec-14_006530|Ec-06_001380|Ec-16_003560|Ec-16_001250}}
 +
{{#set: in pathway=PWY-5136|PWY-7007|FAO-PWY|PWY-5138|PWY66-391}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:23, 21 March 2018

Reaction ENOYL-COA-HYDRAT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ClpP/crotonase-like domain
    • enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
    • Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5136, fatty acid β-oxidation II (peroxisome): PWY-5136
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7007, methyl ketone biosynthesis (engineered): PWY-7007
    • 3 reactions found over 6 reactions in the full pathway
  • FAO-PWY, fatty acid β-oxidation I: FAO-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-5138, unsaturated, even numbered fatty acid β-oxidation: PWY-5138
    • 2 reactions found over 5 reactions in the full pathway
  • PWY66-391, fatty acid β-oxidation VI (peroxisome): PWY66-391
    • 4 reactions found over 7 reactions in the full pathway

Reconstruction information

External links






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