Difference between revisions of "RXN-10657"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SULFATE-ADENYLYLTRANS-RXN SULFATE-ADENYLYLTRANS-RXN] == * direction: ** REVERSIBLE * common name: *...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10657 RXN-10657] == * direction: ** LEFT-TO-RIGHT * common name: ** Glucose/ribitol dehydrogena...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SULFATE-ADENYLYLTRANS-RXN SULFATE-ADENYLYLTRANS-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10657 RXN-10657] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Sulphate adenylyltransferase catalytic domain
+
** Glucose/ribitol dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.7.4 EC-2.7.7.4]
+
** [http://enzyme.expasy.org/EC/1.3.1.9 EC-1.3.1.9]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[SULFATE]][c] '''<=>''' 1 [[APS]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[Trans-D3-cis-D7-tetradecenoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[Cis-Delta7-tetradecenoyl-ACPs]][c] '''+''' 1 [[NAD]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 ATP[c] '''+''' 1 sulfate[c] '''<=>''' 1 adenosine 5'-phosphosulfate[c] '''+''' 1 diphosphate[c]
+
** 1 a trans-&Delta;3-cis-&Delta;7-tetradecenoyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 NADH[c] '''=>''' 1 a cis-&Delta;7-tetradecenoyl-[acp][c] '''+''' 1 NAD+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-12_000240]]
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* Gene: [[Ec-27_002470]]
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** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
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*** Assignment: EC-NUMBER
−
* [[Ec-02_000870]]
+
−
** [[pantograph]]-[[aragem]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[DISSULFRED-PWY]], sulfate reduction IV (dissimilatory): [http://metacyc.org/META/NEW-IMAGE?object=DISSULFRED-PWY DISSULFRED-PWY]
+
* [[PWY-6282]], palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6282 PWY-6282]
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5340]], sulfate activation for sulfonation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5340 PWY-5340]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
* [[PWY-5278]], sulfite oxidation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5278 PWY-5278]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
* [[SULFMETII-PWY]], sulfate reduction II (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=SULFMETII-PWY SULFMETII-PWY]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY-6683]], sulfate reduction III (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6683 PWY-6683]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
−
* [[P224-PWY]], sulfate reduction V (dissimilatory): [http://metacyc.org/META/NEW-IMAGE?object=P224-PWY P224-PWY]
+
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[aragem]]
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*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18133 18133]
+
{{#set: common name=Glucose/ribitol dehydrogenase}}
−
* LIGAND-RXN:
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{{#set: ec number=EC-1.3.1.9}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00529 R00529]
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{{#set: gene associated=Ec-27_002470}}
−
* UNIPROT:
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{{#set: in pathway=PWY-6282}}
−
** [http://www.uniprot.org/uniprot/Q12650 Q12650]
+
−
** [http://www.uniprot.org/uniprot/O33581 O33581]
+
−
** [http://www.uniprot.org/uniprot/O34764 O34764]
+
−
** [http://www.uniprot.org/uniprot/Q10600 Q10600]
+
−
** [http://www.uniprot.org/uniprot/O67174 O67174]
+
−
** [http://www.uniprot.org/uniprot/P21156 P21156]
+
−
** [http://www.uniprot.org/uniprot/O23324 O23324]
+
−
** [http://www.uniprot.org/uniprot/Q9JUD7 Q9JUD7]
+
−
** [http://www.uniprot.org/uniprot/Q9PM66 Q9PM66]
+
−
** [http://www.uniprot.org/uniprot/Q9JUD6 Q9JUD6]
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−
** [http://www.uniprot.org/uniprot/P28604 P28604]
+
−
** [http://www.uniprot.org/uniprot/Q27128 Q27128]
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−
** [http://www.uniprot.org/uniprot/P23845 P23845]
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−
** [http://www.uniprot.org/uniprot/O43252 O43252]
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−
** [http://www.uniprot.org/uniprot/Q43170 Q43170]
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−
** [http://www.uniprot.org/uniprot/Q43183 Q43183]
+
−
** [http://www.uniprot.org/uniprot/Q43870 Q43870]
+
−
** [http://www.uniprot.org/uniprot/Q12555 Q12555]
+
−
** [http://www.uniprot.org/uniprot/P08536 P08536]
+
−
** [http://www.uniprot.org/uniprot/P74241 P74241]
+
−
** [http://www.uniprot.org/uniprot/O48888 O48888]
+
−
** [http://www.uniprot.org/uniprot/Q39595 Q39595]
+
−
** [http://www.uniprot.org/uniprot/Q96349 Q96349]
+
−
** [http://www.uniprot.org/uniprot/Q96541 Q96541]
+
−
** [http://www.uniprot.org/uniprot/Q9S7D8 Q9S7D8]
+
−
** [http://www.uniprot.org/uniprot/P13441 P13441]
+
−
** [http://www.uniprot.org/uniprot/P13442 P13442]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=Sulphate adenylyltransferase catalytic domain}}
+
−
{{#set: ec number=EC-2.7.7.4}}
+
−
{{#set: gene associated=Ec-12_000240|Ec-02_000870}}
+
−
{{#set: in pathway=DISSULFRED-PWY|PWY-5340|PWY-5278|SULFMETII-PWY|PWY-6683|P224-PWY}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=aragem}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 19:23, 21 March 2018

Reaction RXN-10657

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glucose/ribitol dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6282, palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate): PWY-6282
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-10657&oldid=26607"