Difference between revisions of "3.2.1.6-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UROGENDECARBOX-RXN UROGENDECARBOX-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Uroporphy...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.6-RXN 3.2.1.6-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** obsolete endo-1,3(4)-be...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UROGENDECARBOX-RXN UROGENDECARBOX-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.6-RXN 3.2.1.6-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Uroporphyrinogen decarboxylase, chloroplast precursor
+
** obsolete endo-1,3(4)-beta-glucanase
 +
** glucan endo-1,4-beta-glucanase activity, C-3 substituted reducing group
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.1.1.37 EC-4.1.1.37]
+
** [http://enzyme.expasy.org/EC/3.2.1.6 EC-3.2.1.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 4 [[PROTON]][c] '''+''' 1 [[UROPORPHYRINOGEN-III]][c] '''=>''' 1 [[COPROPORPHYRINOGEN_III]][c] '''+''' 4 [[CARBON-DIOXIDE]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[Beta-D-glucan-w-C-3-substitution]][c] '''=>''' 1 [[Beta-D-Glucans]][c]
 
* With common name(s):
 
* With common name(s):
−
** 4 H+[c] '''+''' 1 uroporphyrinogen-III[c] '''=>''' 1 coproporphyrinogen III[c] '''+''' 4 CO2[c]
+
** 1 H2O[c] '''+''' 1 a β-D-glucan with a C3-substituted glucose[c] '''=>''' 1 a β-D glucan[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-01_000360]]
+
* Gene: [[Ec-27_000710]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: GO-TERM
−
* [[Ec-24_000650]]
+
* Gene: [[Ec-13_003840]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: GO-TERM
−
* [[Ec-24_000620]]
+
* Gene: [[Ec-08_004960]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: GO-TERM
 +
* Gene: [[Ec-14_004220]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[HEMESYN2-PWY]], heme biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=HEMESYN2-PWY HEMESYN2-PWY]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY0-1415]], superpathway of heme biosynthesis from uroporphyrinogen-III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1415 PWY0-1415]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7159]], 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159]
 
−
** '''5''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7766]], heme biosynthesis IV (Gram-positive bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7766 PWY-7766]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN]
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[HEME-BIOSYNTHESIS-II]], heme biosynthesis I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5531]], 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5531 PWY-5531]
 
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19865 19865]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03197 R03197]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P06132 P06132]
+
** [http://www.uniprot.org/uniprot/Q9SSU7 Q9SSU7]
−
** [http://www.uniprot.org/uniprot/P16891 P16891]
+
** [http://www.uniprot.org/uniprot/P29716 P29716]
−
** [http://www.uniprot.org/uniprot/P32395 P32395]
+
** [http://www.uniprot.org/uniprot/Q59328 Q59328]
−
** [http://www.uniprot.org/uniprot/Q9PN54 Q9PN54]
+
−
** [http://www.uniprot.org/uniprot/Q9JV52 Q9JV52]
+
−
** [http://www.uniprot.org/uniprot/P29680 P29680]
+
−
** [http://www.uniprot.org/uniprot/P32347 P32347]
+
−
** [http://www.uniprot.org/uniprot/P32920 P32920]
+
−
** [http://www.uniprot.org/uniprot/P54224 P54224]
+
−
** [http://www.uniprot.org/uniprot/O81220 O81220]
+
−
** [http://www.uniprot.org/uniprot/P70697 P70697]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Uroporphyrinogen decarboxylase, chloroplast precursor}}
+
{{#set: common name=obsolete endo-1,3(4)-beta-glucanase}}
−
{{#set: ec number=EC-4.1.1.37}}
+
{{#set: common name=glucan endo-1,4-beta-glucanase activity, C-3 substituted reducing group}}
−
{{#set: gene associated=Ec-01_000360|Ec-24_000650|Ec-24_000620}}
+
{{#set: ec number=EC-3.2.1.6}}
−
{{#set: in pathway=HEMESYN2-PWY|PWY0-1415|PWY-7159|PWY-7766|CHLOROPHYLL-SYN|HEME-BIOSYNTHESIS-II|PWY-5531}}
+
{{#set: gene associated=Ec-27_000710|Ec-13_003840|Ec-08_004960|Ec-14_004220}}
 +
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 19:23, 21 March 2018

Reaction 3.2.1.6-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • obsolete endo-1,3(4)-beta-glucanase
    • glucan endo-1,4-beta-glucanase activity, C-3 substituted reducing group
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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