Difference between revisions of "Ec-18 002860"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11519 RXN-11519] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
(Created page with "Category:Gene == Gene Ec-18_002860 == * left end position: ** 2839635 * transcription direction: ** POSITIVE * right end position: ** 2847056 * centisome position: ** 57.6...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11519 RXN-11519] ==
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== Gene Ec-18_002860 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2839635
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* transcription direction:
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** POSITIVE
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* right end position:
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** 2847056
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* centisome position:
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** 57.639343   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0139_0050
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** Esi0139_0050
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[L-IDITOL-2-DEHYDROGENASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[3-7-DIMETHYLXANTHINE]][c] '''=>''' 1 [[CPD-12482]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H2O[c] '''+''' 1 oxygen[c] '''+''' 1 theobromine[c] '''=>''' 1 3,7-dimethylurate[c] '''+''' 1 hydrogen peroxide[c]
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* Reaction: [[RXN-1102]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-20_000230]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-20_000210]]
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** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
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== Pathways  ==
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* Reaction: [[RXN-1125]]
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* [[PWY-6632]], caffeine degradation IV (bacteria, via demethylation and oxidation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6632 PWY-6632]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Reaction: [[RXN-7644]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-361]]
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* [[PWY-4101]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=2839635}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07978 R07978]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=2847056}}
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{{#set: gene associated=Ec-20_000230|Ec-20_000210}}
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{{#set: centisome position=57.639343    }}
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{{#set: in pathway=PWY-6632}}
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{{#set: common name=Esi_0139_0050|Esi0139_0050}}
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{{#set: reconstruction category=orthology}}
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{{#set: reaction associated=L-IDITOL-2-DEHYDROGENASE-RXN|RXN-1102|RXN-1125|RXN-7644}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: pathway associated=PWY-361|PWY-4101}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:23, 21 March 2018

Gene Ec-18_002860

  • left end position:
    • 2839635
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2847056
  • centisome position:
    • 57.639343
  • Synonym(s):
    • Esi_0139_0050
    • Esi0139_0050

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-18_002860&oldid=26615"