Difference between revisions of "PWY-6415"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SULFATE-ADENYLYLTRANS-RXN SULFATE-ADENYLYLTRANS-RXN] == * direction: ** REVERSIBLE * common name: *...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6415 PWY-6415] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3038 TAX-30...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SULFATE-ADENYLYLTRANS-RXN SULFATE-ADENYLYLTRANS-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6415 PWY-6415] ==
−
* direction:
+
* taxonomic range:
−
** REVERSIBLE
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3038 TAX-3038]
 
* common name:
 
* common name:
−
** Sulphate adenylyltransferase catalytic domain
+
** L-ascorbate biosynthesis V
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.7.7.4 EC-2.7.7.4]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** L-ascorbic acid biosynthesis V
 +
** vitamin c biosynthesis
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''3''' reactions found over '''11''' reactions in the full pathway
−
** 1 [[SULFATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[APS]][c] '''+''' 1 [[PPI]][c]
+
* [[PWY-7343]]
−
* With common name(s):
+
** 0 associated gene:
−
** 1 sulfate[c] '''+''' 1 H+[c] '''+''' 1 ATP[c] '''<=>''' 1 adenosine 5'-phosphosulfate[c] '''+''' 1 diphosphate[c]
+
* [[PWY-7346]]
−
 
+
** 0 associated gene:
−
== Genes associated with this reaction  ==
+
* [[RXN-11152]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** 2 associated gene(s):
−
* Gene: [[Ec-02_000870]]
+
*** [[Ec-10_002500]]
−
** Source: [[orthology-aragem]]
+
*** [[Ec-21_001990]]
−
* Gene: [[Ec-12_000240]]
+
** 1 reconstruction source(s) associated:
−
** Source: [[annotation-esiliculosus_genome]]
+
*** [[annotation-esiliculosus_genome]]
−
*** Assignment: EC-NUMBER
+
== Reaction(s) not found ==
−
== Pathways  ==
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11147 RXN-11147]
−
* [[DISSULFRED-PWY]], sulfate reduction IV (dissimilatory): [http://metacyc.org/META/NEW-IMAGE?object=DISSULFRED-PWY DISSULFRED-PWY]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11150 RXN-11150]
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11151 RXN-11151]
−
* [[PWY-5340]], sulfate activation for sulfonation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5340 PWY-5340]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11153 RXN-11153]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14753 RXN-14753]
−
* [[PWY-5278]], sulfite oxidation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5278 PWY-5278]
+
* [http://metacyc.org/META/NEW-IMAGE?object=UDP-GLUCURONATE-4-EPIMERASE-RXN UDP-GLUCURONATE-4-EPIMERASE-RXN]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
* [[SULFMETII-PWY]], sulfate reduction II (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=SULFMETII-PWY SULFMETII-PWY]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY-6683]], sulfate reduction III (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6683 PWY-6683]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
−
* [[P224-PWY]], sulfate reduction V (dissimilatory): [http://metacyc.org/META/NEW-IMAGE?object=P224-PWY P224-PWY]
+
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-aragem]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: taxonomic range=TAX-3038}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18133 18133]
+
{{#set: common name=L-ascorbate biosynthesis V}}
−
* LIGAND-RXN:
+
{{#set: common name=L-ascorbic acid biosynthesis V|vitamin c biosynthesis}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00529 R00529]
+
{{#set: reaction found=3}}
−
* UNIPROT:
+
{{#set: total reaction=11}}
−
** [http://www.uniprot.org/uniprot/Q12650 Q12650]
+
{{#set: completion rate=27.0}}
−
** [http://www.uniprot.org/uniprot/O33581 O33581]
+
−
** [http://www.uniprot.org/uniprot/O34764 O34764]
+
−
** [http://www.uniprot.org/uniprot/Q10600 Q10600]
+
−
** [http://www.uniprot.org/uniprot/O67174 O67174]
+
−
** [http://www.uniprot.org/uniprot/P21156 P21156]
+
−
** [http://www.uniprot.org/uniprot/O23324 O23324]
+
−
** [http://www.uniprot.org/uniprot/Q9JUD7 Q9JUD7]
+
−
** [http://www.uniprot.org/uniprot/Q9PM66 Q9PM66]
+
−
** [http://www.uniprot.org/uniprot/Q9JUD6 Q9JUD6]
+
−
** [http://www.uniprot.org/uniprot/P28604 P28604]
+
−
** [http://www.uniprot.org/uniprot/Q27128 Q27128]
+
−
** [http://www.uniprot.org/uniprot/P23845 P23845]
+
−
** [http://www.uniprot.org/uniprot/O43252 O43252]
+
−
** [http://www.uniprot.org/uniprot/Q43170 Q43170]
+
−
** [http://www.uniprot.org/uniprot/Q43183 Q43183]
+
−
** [http://www.uniprot.org/uniprot/Q43870 Q43870]
+
−
** [http://www.uniprot.org/uniprot/Q12555 Q12555]
+
−
** [http://www.uniprot.org/uniprot/P08536 P08536]
+
−
** [http://www.uniprot.org/uniprot/P74241 P74241]
+
−
** [http://www.uniprot.org/uniprot/O48888 O48888]
+
−
** [http://www.uniprot.org/uniprot/Q39595 Q39595]
+
−
** [http://www.uniprot.org/uniprot/Q96349 Q96349]
+
−
** [http://www.uniprot.org/uniprot/Q96541 Q96541]
+
−
** [http://www.uniprot.org/uniprot/Q9S7D8 Q9S7D8]
+
−
** [http://www.uniprot.org/uniprot/P13441 P13441]
+
−
** [http://www.uniprot.org/uniprot/P13442 P13442]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=Sulphate adenylyltransferase catalytic domain}}
+
−
{{#set: ec number=EC-2.7.7.4}}
+
−
{{#set: gene associated=Ec-02_000870|Ec-12_000240}}
+
−
{{#set: in pathway=DISSULFRED-PWY|PWY-5340|PWY-5278|SULFMETII-PWY|PWY-6683|P224-PWY}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:24, 21 March 2018

Pathway PWY-6415

  • taxonomic range:
  • common name:
    • L-ascorbate biosynthesis V
  • Synonym(s):
    • L-ascorbic acid biosynthesis V
    • vitamin c biosynthesis

Reaction(s) found

3 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-6415&oldid=26715"