Difference between revisions of "PRAISOM-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6307 PWY-6307] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-4...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRAISOM-RXN PRAISOM-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Indole-3-glycerol phosp...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6307 PWY-6307] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRAISOM-RXN PRAISOM-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-40674]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** L-tryptophan degradation X (mammalian, via tryptamine)
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** Indole-3-glycerol phosphate synthase
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* ec number:
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** [http://enzyme.expasy.org/EC/5.3.1.24 EC-5.3.1.24]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''4''' reactions in the full pathway
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* With identifiers:
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* [[RXN-10715]]
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** 1 [[N-5-PHOSPHORIBOSYL-ANTHRANILATE]][c] '''=>''' 1 [[CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Ec-11_002450]]
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** 1 N-(5-phosphoribosyl)-anthranilate[c] '''=>''' 1 1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate[c]
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** 1 reconstruction source(s) associated:
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*** [[orthology-aragem]]
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== Genes associated with this reaction  ==
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== Reaction(s) not found ==
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Genes have been associated with this reaction based on different elements listed below.
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* [http://metacyc.org/META/NEW-IMAGE?object=AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN]
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* Gene: [[Ec-08_003020]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10717 RXN-10717]
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1401 RXN-1401]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[TRPSYN-PWY]], L-tryptophan biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TRPSYN-PWY TRPSYN-PWY]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-40674}}
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* RHEA:
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{{#set: common name=L-tryptophan degradation X (mammalian, via tryptamine)}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21540 21540]
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{{#set: reaction found=1}}
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* LIGAND-RXN:
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{{#set: total reaction=4}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03509 R03509]
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{{#set: completion rate=25.0}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P16923 P16923]
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** [http://www.uniprot.org/uniprot/O67853 O67853]
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** [http://www.uniprot.org/uniprot/P12289 P12289]
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** [http://www.uniprot.org/uniprot/P42393 P42393]
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** [http://www.uniprot.org/uniprot/Q9PIF3 Q9PIF3]
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** [http://www.uniprot.org/uniprot/Q57893 Q57893]
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** [http://www.uniprot.org/uniprot/P20167 P20167]
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** [http://www.uniprot.org/uniprot/Q9JVD1 Q9JVD1]
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** [http://www.uniprot.org/uniprot/P00910 P00910]
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** [http://www.uniprot.org/uniprot/P00909 P00909]
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** [http://www.uniprot.org/uniprot/P00912 P00912]
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** [http://www.uniprot.org/uniprot/P13997 P13997]
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** [http://www.uniprot.org/uniprot/P50857 P50857]
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** [http://www.uniprot.org/uniprot/P27710 P27710]
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** [http://www.uniprot.org/uniprot/P17218 P17218]
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** [http://www.uniprot.org/uniprot/P00908 P00908]
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** [http://www.uniprot.org/uniprot/P18483 P18483]
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** [http://www.uniprot.org/uniprot/Q02002 Q02002]
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** [http://www.uniprot.org/uniprot/Q56320 Q56320]
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** [http://www.uniprot.org/uniprot/Q01128 Q01128]
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** [http://www.uniprot.org/uniprot/P74435 P74435]
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** [http://www.uniprot.org/uniprot/Q9YGB1 Q9YGB1]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Indole-3-glycerol phosphate synthase}}
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{{#set: ec number=EC-5.3.1.24}}
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{{#set: gene associated=Ec-08_003020}}
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{{#set: in pathway=TRPSYN-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:24, 21 March 2018

Reaction PRAISOM-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Indole-3-glycerol phosphate synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • TRPSYN-PWY, L-tryptophan biosynthesis: TRPSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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