Difference between revisions of "Ec-08 001740"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.119-RXN 2.4.1.119-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** DAD/Ost2 ** Dolichy...")
(Created page with "Category:Gene == Gene Ec-08_001740 == * left end position: ** 1783064 * transcription direction: ** POSITIVE * right end position: ** 1794738 * centisome position: ** 26.6...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.119-RXN 2.4.1.119-RXN] ==
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== Gene Ec-08_001740 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1783064
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* common name:
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* transcription direction:
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** DAD/Ost2
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** POSITIVE
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** Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit Swp1
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* right end position:
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** Oligosaccharyl transferase complex, subunit OST3/OST6
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** 1794738
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** Ribophorin I
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* centisome position:
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** Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit WBP1
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** 26.624554   
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** Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A, C-terminal fragment, family GT66
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** Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A, N-terminal fragment, family GT66
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* ec number:
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** [http://enzyme.expasy.org/EC/2.4.99.18 EC-2.4.99.18]
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* Synonym(s):
 
* Synonym(s):
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** Esi_0007_0074
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** Esi0007_0074
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** Gpx4
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GLUTATHIONE-PEROXIDASE-RXN]]
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** 1 [[CPD-18076]][c] '''+''' 1 [[Protein-L-Asparagine]][c] '''=>''' 1 [[CPD-18077]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-224]][c]
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* With common name(s):
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** 1 a (glucosyl)3(mannosyl)9-(N-acetylglucosaminyl)2-diphosphodolichol[c] '''+''' 1 a [protein]-L-asparagine[c] '''=>''' 1 a [protein]-L-asparagine-[(glucosyl)3(mannosyl)9(N-acetylglucosaminyl)2][c] '''+''' 1 H+[c] '''+''' 1 a dolichyl diphosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-07_004230]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-22_002490]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-00_007060]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-14_004370]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-00_007050]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-10_002870]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-09_000810]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
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** '''19''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[DETOX1-PWY-1]]
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* [[PWY-4081]]
 
== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: left end position=1783064}}
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** [http://www.uniprot.org/uniprot/P39656 P39656]
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{{#set: transcription direction=POSITIVE}}
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** [http://www.uniprot.org/uniprot/P48440 P48440]
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{{#set: right end position=1794738}}
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** [http://www.uniprot.org/uniprot/P41543 P41543]
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{{#set: centisome position=26.624554    }}
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** [http://www.uniprot.org/uniprot/P80896 P80896]
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{{#set: common name=Esi_0007_0074|Esi0007_0074|Gpx4}}
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** [http://www.uniprot.org/uniprot/P80897 P80897]
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{{#set: reaction associated=GLUTATHIONE-PEROXIDASE-RXN}}
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** [http://www.uniprot.org/uniprot/P48439 P48439]
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{{#set: pathway associated=DETOX1-PWY-1|PWY-4081}}
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** [http://www.uniprot.org/uniprot/P46964 P46964]
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** [http://www.uniprot.org/uniprot/Q92316 Q92316]
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** [http://www.uniprot.org/uniprot/Q10176 Q10176]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=DAD/Ost2}}
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{{#set: common name=Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit Swp1}}
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{{#set: common name=Oligosaccharyl transferase complex, subunit OST3/OST6}}
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{{#set: common name=Ribophorin I}}
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{{#set: common name=Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit WBP1}}
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{{#set: common name=Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A, C-terminal fragment, family GT66}}
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{{#set: common name=Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A, N-terminal fragment, family GT66}}
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{{#set: ec number=EC-2.4.99.18}}
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{{#set: gene associated=Ec-07_004230|Ec-22_002490|Ec-00_007060|Ec-14_004370|Ec-00_007050|Ec-10_002870|Ec-09_000810}}
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{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:25, 21 March 2018

Gene Ec-08_001740

  • left end position:
    • 1783064
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1794738
  • centisome position:
    • 26.624554
  • Synonym(s):
    • Esi_0007_0074
    • Esi0007_0074
    • Gpx4

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-08_001740&oldid=26749"