Difference between revisions of "PWY-6502"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE-AMINOTRANSFERASE-RXN TYROSINE-AMINOTRANSFERASE-RXN] == * direction: ** REVERSIBLE * ec num...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6502 PWY-6502] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-3...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE-AMINOTRANSFERASE-RXN TYROSINE-AMINOTRANSFERASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6502 PWY-6502] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-33154]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** [http://enzyme.expasy.org/EC/2.6.1.57 EC-2.6.1.57]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://enzyme.expasy.org/EC/2.6.1.5 EC-2.6.1.5]
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* common name:
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** oxidized GTP and dGTP detoxification
 
* Synonym(s):
 
* Synonym(s):
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** 8-oxo-(d)GTP detoxification
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** oxidized guanosine triphosphate and deoxyguanosine triphosphate detoxification
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** 8-oxo-7,8-dihydro-guanosine-triphosphate and 8-oxo-7,8-dihydro-deoxyguanosine-triphosphate
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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  '''2''' reactions found over '''4''' reactions in the full pathway
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** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[TYR]][c] '''<=>''' 1 [[P-HYDROXY-PHENYLPYRUVATE]][c] '''+''' 1 [[GLT]][c]
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* [[RXN-11409]]
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* With common name(s):
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** 0 associated gene:
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** 1 2-oxoglutarate[c] '''+''' 1 L-tyrosine[c] '''<=>''' 1 4-hydroxyphenylpyruvate[c] '''+''' 1 L-glutamate[c]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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* [[RXN-11410]]
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== Pathways ==
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** 0 associated gene:
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* [[PWY3O-4108]], L-tyrosine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-4108 PWY3O-4108]
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** 1 reconstruction source(s) associated:
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** '''2''' reactions found over '''4''' reactions in the full pathway
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*** [[annotation-esiliculosus_genome]]
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* [[TYRFUMCAT-PWY]], L-tyrosine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=TYRFUMCAT-PWY TYRFUMCAT-PWY]
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== Reaction(s) not found ==
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11396 RXN-11396]
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* [[PWY-5886]], 4-hydroxyphenylpyruvate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5886 PWY-5886]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11397 RXN-11397]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-5151]], L-tyrosine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5151 PWY-5151]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7518]], atromentin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7518 PWY-7518]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[TYRSYN]], L-tyrosine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=TYRSYN TYRSYN]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-3581]], (S)-reticuline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3581 PWY-3581]
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** '''3''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-7514]], L-tyrosine degradation IV (to 4-methylphenol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7514 PWY-7514]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5754]], 4-hydroxybenzoate biosynthesis I (eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5754 PWY-5754]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5048]], rosmarinic acid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5048 PWY-5048]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[gap-filling]]
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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*** Tool: [[meneco]]
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**** Comment: [[added for gapfilling]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PLANTCYC : PWY-6502
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15093 15093]
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{{#set: taxonomic range=TAX-33154}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00734 R00734]
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{{#set: taxonomic range=TAX-2}}
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* UNIPROT:
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{{#set: common name=oxidized GTP and dGTP detoxification}}
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** [http://www.uniprot.org/uniprot/P74861 P74861]
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{{#set: common name=8-oxo-(d)GTP detoxification|oxidized guanosine triphosphate and deoxyguanosine triphosphate detoxification|8-oxo-7,8-dihydro-guanosine-triphosphate and 8-oxo-7,8-dihydro-deoxyguanosine-triphosphate}}
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** [http://www.uniprot.org/uniprot/Q9UWK8 Q9UWK8]
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{{#set: reaction found=2}}
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** [http://www.uniprot.org/uniprot/Q9UWK9 Q9UWK9]
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{{#set: total reaction=4}}
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** [http://www.uniprot.org/uniprot/P95468 P95468]
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{{#set: completion rate=50.0}}
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** [http://www.uniprot.org/uniprot/Q9JYA1 Q9JYA1]
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** [http://www.uniprot.org/uniprot/Q9JT83 Q9JT83]
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** [http://www.uniprot.org/uniprot/Q9UZ63 Q9UZ63]
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** [http://www.uniprot.org/uniprot/O58489 O58489]
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** [http://www.uniprot.org/uniprot/O59096 O59096]
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** [http://www.uniprot.org/uniprot/Q9PHA8 Q9PHA8]
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** [http://www.uniprot.org/uniprot/Q9V0L2 Q9V0L2]
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** [http://www.uniprot.org/uniprot/Q9Z7G5 Q9Z7G5]
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** [http://www.uniprot.org/uniprot/Q02636 Q02636]
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** [http://www.uniprot.org/uniprot/O84642 O84642]
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** [http://www.uniprot.org/uniprot/P17735 P17735]
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** [http://www.uniprot.org/uniprot/Q7M4A9 Q7M4A9]
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** [http://www.uniprot.org/uniprot/P04693 P04693]
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** [http://www.uniprot.org/uniprot/P04694 P04694]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-2.6.1.57}}
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{{#set: ec number=EC-2.6.1.5}}
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{{#set: in pathway=PWY3O-4108|TYRFUMCAT-PWY|PWY-5886|PWY-5151|PWY-7518|TYRSYN|PWY-3581|PWY-7514|PWY-5754|PWY-5048}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
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{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction comment=added for gapfilling}}
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Latest revision as of 19:25, 21 March 2018

Pathway PWY-6502

  • taxonomic range:
  • common name:
    • oxidized GTP and dGTP detoxification
  • Synonym(s):
    • 8-oxo-(d)GTP detoxification
    • oxidized guanosine triphosphate and deoxyguanosine triphosphate detoxification
    • 8-oxo-7,8-dihydro-guanosine-triphosphate and 8-oxo-7,8-dihydro-deoxyguanosine-triphosphate

Reaction(s) found

2 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links

  • PLANTCYC : PWY-6502





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