Difference between revisions of "Ec-06 001610"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.4.11-RXN 6.3.4.11-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Biotin/lipoate A/B pr...")
(Created page with "Category:Gene == Gene Ec-06_001610 == * left end position: ** 1086439 * transcription direction: ** POSITIVE * right end position: ** 1096761 * centisome position: ** 12.4...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.4.11-RXN 6.3.4.11-RXN] ==
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== Gene Ec-06_001610 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1086439
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* common name:
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* transcription direction:
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** Biotin/lipoate A/B protein ligase
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** POSITIVE
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** Biotin/lipoate A/B protein ligase family
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* right end position:
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* ec number:
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** 1096761
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** [http://enzyme.expasy.org/EC/6.3.4.11 EC-6.3.4.11]
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* centisome position:
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** 12.405447   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0141_0021
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** Esi0141_0021
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** THA1
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[THREONINE-ALDOLASE-RXN]]
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** 1 [[Apo-3-methylcrotonoyl-CoA-carbon-dioxide]][c] '''+''' 1 [[BIOTIN]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[3-methylcrotonoyl-CoA-carbon-dioxide]][c] '''+''' 1 [[AMP]][c]
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* With common name(s):
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** 1 an apo-[3-methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)][c] '''+''' 1 biotin[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 a holo-[3-methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)][c] '''+''' 1 AMP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-00_003530]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-05_005190]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-11_004970]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-01_008620]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[GLYSYN-THR-PWY]]
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* [[PWY-5436]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=1086439}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04604 R04604]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=1096761}}
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{{#set: common name=Biotin/lipoate A/B protein ligase}}
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{{#set: centisome position=12.405447    }}
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{{#set: common name=Biotin/lipoate A/B protein ligase family}}
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{{#set: common name=Esi_0141_0021|Esi0141_0021|THA1}}
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{{#set: ec number=EC-6.3.4.11}}
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{{#set: reaction associated=THREONINE-ALDOLASE-RXN}}
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{{#set: gene associated=Ec-00_003530|Ec-05_005190|Ec-11_004970|Ec-01_008620}}
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{{#set: pathway associated=GLYSYN-THR-PWY|PWY-5436}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:25, 21 March 2018

Gene Ec-06_001610

  • left end position:
    • 1086439
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1096761
  • centisome position:
    • 12.405447
  • Synonym(s):
    • Esi_0141_0021
    • Esi0141_0021
    • THA1

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-06_001610&oldid=26774"