Difference between revisions of "CATAL-RXN"

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(Created page with "Category:Gene == Gene Ec-07_002990 == * left end position: ** 3210217 * transcription direction: ** NEGATIVE * right end position: ** 3216018 * centisome position: ** 41.5...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CATAL-RXN CATAL-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Catalase-peroxidase haem **...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-07_002990 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CATAL-RXN CATAL-RXN] ==
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* left end position:
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* direction:
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** 3210217
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
−
** NEGATIVE
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** Catalase-peroxidase haem
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* right end position:
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** Haem peroxidase, plant/fungal/bacterial
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** 3216018
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** Haem peroxidase
−
* centisome position:
+
** catalase/peroxidase
−
** 41.570038   
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** Catalase core domain
 +
** Catalase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.11.1.6 EC-1.11.1.6]
 +
** [http://enzyme.expasy.org/EC/1.11.1.21 EC-1.11.1.21]
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0327_0010
 
−
** Esi0327_0010
 
  
−
== Reactions associated ==
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== Reaction Formula ==
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* [[RXN0-1061]]
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* With identifiers:
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** esiliculosus_genome
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** 2 [[HYDROGEN-PEROXIDE]][c] '''=>''' 2 [[WATER]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c]
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***automated-name-match
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* With common name(s):
−
== Pathways associated ==
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** 2 hydrogen peroxide[c] '''=>''' 2 H2O[c] '''+''' 1 oxygen[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-02_000470]]
 +
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-07_001420]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-00_008210]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-11_003410]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-00_008230]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-00_010030]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-00_008240]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-07_004600]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-05_003380]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways ==
 +
* [[PWY-5506]], methanol oxidation to formaldehyde IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5506 PWY-5506]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[DETOX1-PWY-1]], reactive oxygen species degradation: [http://metacyc.org/META/NEW-IMAGE?object=DETOX1-PWY-1 DETOX1-PWY-1]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[DETOX1-PWY]], superoxide radicals degradation: [http://metacyc.org/META/NEW-IMAGE?object=DETOX1-PWY DETOX1-PWY]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=3210217}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20309 20309]
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{{#set: right end position=3216018}}
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* LIGAND-RXN:
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{{#set: centisome position=41.570038    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00009 R00009]
−
{{#set: common name=Esi_0327_0010|Esi0327_0010}}
+
* UNIPROT:
−
{{#set: reaction associated=RXN0-1061}}
+
** [http://www.uniprot.org/uniprot/P11934 P11934]
 +
** [http://www.uniprot.org/uniprot/P24270 P24270]
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** [http://www.uniprot.org/uniprot/P21179 P21179]
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** [http://www.uniprot.org/uniprot/P24168 P24168]
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** [http://www.uniprot.org/uniprot/Q7M184 Q7M184]
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** [http://www.uniprot.org/uniprot/P0A327 P0A327]
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** [http://www.uniprot.org/uniprot/P45737 P45737]
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** [http://www.uniprot.org/uniprot/P42321 P42321]
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** [http://www.uniprot.org/uniprot/O28050 O28050]
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** [http://www.uniprot.org/uniprot/Q59337 Q59337]
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** [http://www.uniprot.org/uniprot/P77872 P77872]
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** [http://www.uniprot.org/uniprot/P00432 P00432]
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** [http://www.uniprot.org/uniprot/P15202 P15202]
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** [http://www.uniprot.org/uniprot/P06115 P06115]
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** [http://www.uniprot.org/uniprot/P07820 P07820]
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** [http://www.uniprot.org/uniprot/P17750 P17750]
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** [http://www.uniprot.org/uniprot/P13029 P13029]
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** [http://www.uniprot.org/uniprot/P17336 P17336]
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** [http://www.uniprot.org/uniprot/P04040 P04040]
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** [http://www.uniprot.org/uniprot/P25890 P25890]
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** [http://www.uniprot.org/uniprot/P04762 P04762]
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** [http://www.uniprot.org/uniprot/P29756 P29756]
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** [http://www.uniprot.org/uniprot/P44390 P44390]
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** [http://www.uniprot.org/uniprot/P42234 P42234]
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** [http://www.uniprot.org/uniprot/Q9JRF5 Q9JRF5]
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** [http://www.uniprot.org/uniprot/P94377 P94377]
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** [http://www.uniprot.org/uniprot/Q9ZKX5 Q9ZKX5]
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** [http://www.uniprot.org/uniprot/Q59296 Q59296]
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** [http://www.uniprot.org/uniprot/P55306 P55306]
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** [http://www.uniprot.org/uniprot/P26901 P26901]
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** [http://www.uniprot.org/uniprot/P14412 P14412]
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** [http://www.uniprot.org/uniprot/P07145 P07145]
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** [http://www.uniprot.org/uniprot/P17598 P17598]
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** [http://www.uniprot.org/uniprot/Q41136 Q41136]
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** [http://www.uniprot.org/uniprot/P30567 P30567]
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** [http://www.uniprot.org/uniprot/P30263 P30263]
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** [http://www.uniprot.org/uniprot/P29422 P29422]
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** [http://www.uniprot.org/uniprot/P30266 P30266]
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** [http://www.uniprot.org/uniprot/P37743 P37743]
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** [http://www.uniprot.org/uniprot/P33569 P33569]
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** [http://www.uniprot.org/uniprot/P18123 P18123]
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** [http://www.uniprot.org/uniprot/P55303 P55303]
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** [http://www.uniprot.org/uniprot/Q01297 Q01297]
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** [http://www.uniprot.org/uniprot/P49318 P49318]
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** [http://www.uniprot.org/uniprot/P18122 P18122]
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** [http://www.uniprot.org/uniprot/P49315 P49315]
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** [http://www.uniprot.org/uniprot/Q27710 Q27710]
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** [http://www.uniprot.org/uniprot/P45739 P45739]
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** [http://www.uniprot.org/uniprot/P0A323 P0A323]
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** [http://www.uniprot.org/uniprot/P55307 P55307]
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** [http://www.uniprot.org/uniprot/P55308 P55308]
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** [http://www.uniprot.org/uniprot/P55305 P55305]
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** [http://www.uniprot.org/uniprot/P50979 P50979]
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** [http://www.uniprot.org/uniprot/Q55110 Q55110]
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** [http://www.uniprot.org/uniprot/P12365 P12365]
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** [http://www.uniprot.org/uniprot/P73911 P73911]
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** [http://www.uniprot.org/uniprot/P77038 P77038]
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** [http://www.uniprot.org/uniprot/P25819 P25819]
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** [http://www.uniprot.org/uniprot/O48562 O48562]
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** [http://www.uniprot.org/uniprot/Q43206 Q43206]
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** [http://www.uniprot.org/uniprot/O22472 O22472]
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** [http://www.uniprot.org/uniprot/P30265 P30265]
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** [http://www.uniprot.org/uniprot/P48351 P48351]
 +
** [http://www.uniprot.org/uniprot/P48352 P48352]
 +
** [http://www.uniprot.org/uniprot/Q39633 Q39633]
 +
** [http://www.uniprot.org/uniprot/Q39634 Q39634]
 +
** [http://www.uniprot.org/uniprot/P32290 P32290]
 +
** [http://www.uniprot.org/uniprot/O81336 O81336]
 +
** [http://www.uniprot.org/uniprot/O81337 O81337]
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** [http://www.uniprot.org/uniprot/P49317 P49317]
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** [http://www.uniprot.org/uniprot/Q27487 Q27487]
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** [http://www.uniprot.org/uniprot/Q8MYL7 Q8MYL7]
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** [http://www.uniprot.org/uniprot/Q9Z598 Q9Z598]
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** [http://www.uniprot.org/uniprot/O61235 O61235]
 +
** [http://www.uniprot.org/uniprot/O33613 O33613]
 +
** [http://www.uniprot.org/uniprot/P77948 P77948]
 +
** [http://www.uniprot.org/uniprot/O73955 O73955]
 +
** [http://www.uniprot.org/uniprot/O59651 O59651]
 +
** [http://www.uniprot.org/uniprot/O31066 O31066]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Catalase-peroxidase haem}}
 +
{{#set: common name=Haem peroxidase, plant/fungal/bacterial}}
 +
{{#set: common name=Haem peroxidase}}
 +
{{#set: common name=catalase/peroxidase}}
 +
{{#set: common name=Catalase core domain}}
 +
{{#set: common name=Catalase}}
 +
{{#set: ec number=EC-1.11.1.6}}
 +
{{#set: ec number=EC-1.11.1.21}}
 +
{{#set: gene associated=Ec-02_000470|Ec-07_001420|Ec-00_008210|Ec-11_003410|Ec-00_008230|Ec-00_010030|Ec-00_008240|Ec-07_004600|Ec-05_003380}}
 +
{{#set: in pathway=PWY-5506|DETOX1-PWY-1|DETOX1-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:25, 21 March 2018

Reaction CATAL-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Catalase-peroxidase haem
    • Haem peroxidase, plant/fungal/bacterial
    • Haem peroxidase
    • catalase/peroxidase
    • Catalase core domain
    • Catalase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5506, methanol oxidation to formaldehyde IV: PWY-5506
    • 1 reactions found over 2 reactions in the full pathway
  • DETOX1-PWY-1, reactive oxygen species degradation: DETOX1-PWY-1
    • 5 reactions found over 6 reactions in the full pathway
  • DETOX1-PWY, superoxide radicals degradation: DETOX1-PWY
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links








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