Difference between revisions of "RXN-15129"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14116 RXN-14116] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15129 RXN-15129] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyridoxal phosphate-depende...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14116 RXN-14116] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15129 RXN-15129] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* ec number:
+
* common name:
** [http://enzyme.expasy.org/EC/1.2.1.88 EC-1.2.1.88]
+
** Pyridoxal phosphate-dependent transferase, major region, subdomain 1
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[WATER]][c] '''+''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c] '''+''' 1 [[NAD]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[GLT]][c]
+
** 1 [[CYS]][c] '''=>''' 1 [[2-AMINOACRYLATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[HS]][c]
 
* With common name(s):
 
* With common name(s):
** 1 H2O[c] '''+''' 1 L-glutamate-5-semialdehyde[c] '''+''' 1 NAD+[c] '''=>''' 2 H+[c] '''+''' 1 NADH[c] '''+''' 1 L-glutamate[c]
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** 1 L-cysteine[c] '''=>''' 1 2-aminoprop-2-enoate[c] '''+''' 1 H+[c] '''+''' 1 hydrogen sulfide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-12_003100]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
* [[PROUT-PWY]], L-proline degradation: [http://metacyc.org/META/NEW-IMAGE?object=PROUT-PWY PROUT-PWY]
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* [[LCYSDEG-PWY]], L-cysteine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=LCYSDEG-PWY LCYSDEG-PWY]
** '''3''' reactions found over '''3''' reactions in the full pathway
+
* [[ARGASEDEG-PWY]], L-arginine degradation I (arginase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGASEDEG-PWY ARGASEDEG-PWY]
+
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
* [[PWY-6853]], ethylene biosynthesis II (microbes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6853 PWY-6853]
 
** '''2''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30236 30236]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00245 R00245]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: ec number=EC-1.2.1.88}}
+
{{#set: common name=Pyridoxal phosphate-dependent transferase, major region, subdomain 1}}
{{#set: in pathway=PROUT-PWY|ARGASEDEG-PWY|PWY-6853}}
+
{{#set: gene associated=Ec-12_003100}}
 +
{{#set: in pathway=LCYSDEG-PWY}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:25, 21 March 2018

Reaction RXN-15129

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Pyridoxal phosphate-dependent transferase, major region, subdomain 1
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-cysteine[c] => 1 2-aminoprop-2-enoate[c] + 1 H+[c] + 1 hydrogen sulfide[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links