Difference between revisions of "RXN-10642"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLCROTONYL-COA-CARBOXYLASE-RXN METHYLCROTONYL-COA-CARBOXYLASE-RXN] == * direction: ** LEFT-TO-R...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10642 RXN-10642] == * direction: ** REVERSIBLE * common name: ** Uroporphyrinogen decarboxylase...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLCROTONYL-COA-CARBOXYLASE-RXN METHYLCROTONYL-COA-CARBOXYLASE-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10642 RXN-10642] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
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** REVERSIBLE
 
* common name:
 
* common name:
−
** Methylcrotonoyl-CoA carboxylase beta chain
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** Uroporphyrinogen decarboxylase, chloroplast precursor
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.4.1.4 EC-6.4.1.4]
+
** [http://enzyme.expasy.org/EC/4.1.1.37 EC-4.1.1.37]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[3-METHYL-CROTONYL-COA]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[TRANS-3-METHYL-GLUTACONYL-COA]][c]
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** 4 [[PROTON]][c] '''+''' 1 [[CPD-11444]][c] '''<=>''' 1 [[COPROPORPHYRINOGEN_I]][c] '''+''' 4 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 3-methylcrotonyl-CoA[c] '''+''' 1 ATP[c] '''+''' 1 hydrogen carbonate[c] '''=>''' 1 H+[c] '''+''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 3-methylglutaconyl-CoA[c]
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** 4 H+[c] '''+''' 1 uroporphyrinogen-I[c] '''<=>''' 1 coproporphyrinogen I[c] '''+''' 4 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-22_002400]]
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* Gene: [[Ec-24_000620]]
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** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
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***EC-NUMBER
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*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[aragem]]
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* Gene: [[Ec-24_000650]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-01_000360]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[LEU-DEG2-PWY]], L-leucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY]
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-aragem]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13589 13589]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31239 31239]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R04138 R04138]
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** [http://www.genome.jp/dbget-bin/www_bget?R04972 R04972]
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* UNIPROT:
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{{#set: direction=REVERSIBLE}}
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** [http://www.uniprot.org/uniprot/Q40121 Q40121]
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{{#set: common name=Uroporphyrinogen decarboxylase, chloroplast precursor}}
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** [http://www.uniprot.org/uniprot/Q42777 Q42777]
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{{#set: ec number=EC-4.1.1.37}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: gene associated=Ec-24_000620|Ec-24_000650|Ec-01_000360}}
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{{#set: common name=Methylcrotonoyl-CoA carboxylase beta chain}}
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{{#set: in pathway=}}
−
{{#set: ec number=EC-6.4.1.4}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: gene associated=Ec-22_002400}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
{{#set: in pathway=LEU-DEG2-PWY}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:25, 21 March 2018

Reaction RXN-10642

  • direction:
    • REVERSIBLE
  • common name:
    • Uroporphyrinogen decarboxylase, chloroplast precursor
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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