Difference between revisions of "GLUTAMIN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROXYMETVALDEHYDRAT-RXN DIHYDROXYMETVALDEHYDRAT-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMIN-RXN GLUTAMIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** asparagine synthase (...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROXYMETVALDEHYDRAT-RXN DIHYDROXYMETVALDEHYDRAT-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMIN-RXN GLUTAMIN-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 2,3-Dihydroxy-3-methylvalerate dehydratase
+
** asparagine synthase (glutamine-hydrolyzing)
−
** Dihydroxy-acid/6-phosphogluconate dehydratase
+
** carbamoyl-phosphate synthase (glutamine-hydrolyzing)
 +
** Aldolase-type TIM barrel
 +
** CTP synthase
 +
** glutaminase
 +
** Asparaginase/glutaminase
 +
** Asparagine synthase, glutamine-hydrolyzing
 +
** Glutamate synthase (ferredoxin-dependent)
 +
** GMP synthase (glutamine-hydrolyzing)
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.1.9 EC-4.2.1.9]
+
** [http://enzyme.expasy.org/EC/3.5.1.38 EC-3.5.1.38]
 +
** [http://enzyme.expasy.org/EC/3.5.1.2 EC-3.5.1.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[1-KETO-2-METHYLVALERATE]][c] '''=>''' 1 [[2-KETO-3-METHYL-VALERATE]][c] '''+''' 1 [[WATER]][c]
+
** 1 [[GLN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[GLT]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (R)-2,3-dihydroxy-3-methylpentanoate[c] '''=>''' 1 (S)-3-methyl-2-oxopentanoate[c] '''+''' 1 H2O[c]
+
** 1 L-glutamine[c] '''+''' 1 H2O[c] '''=>''' 1 ammonium[c] '''+''' 1 L-glutamate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-03_000220]]
+
* Gene: [[Ec-10_006110]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: GO-TERM
−
** [[pantograph]]-[[aragem]]
+
* Gene: [[Ec-00_000570]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-00_000720]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-06_001280]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-28_000990]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-27_004970]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-11_002360]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-15_004750]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-13_002710]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-15_003670]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5103]], L-isoleucine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5103 PWY-5103]
+
* [[GLUTAMINDEG-PWY]], L-glutamine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINDEG-PWY GLUTAMINDEG-PWY]
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY]
+
* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5101]], L-isoleucine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101]
+
−
** '''4''' reactions found over '''8''' reactions in the full pathway
+
−
* [[PWY-5104]], L-isoleucine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5104 PWY-5104]
+
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-aragem]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27694 27694]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15889 15889]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05070 R05070]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00256 R00256]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P55186 P55186]
+
** [http://www.uniprot.org/uniprot/P10172 P10172]
−
** [http://www.uniprot.org/uniprot/Q9JUE0 Q9JUE0]
+
** [http://www.uniprot.org/uniprot/P28492 P28492]
−
** [http://www.uniprot.org/uniprot/P05791 P05791]
+
−
** [http://www.uniprot.org/uniprot/Q9UZ03 Q9UZ03]
+
−
** [http://www.uniprot.org/uniprot/P44851 P44851]
+
−
** [http://www.uniprot.org/uniprot/Q02139 Q02139]
+
−
** [http://www.uniprot.org/uniprot/Q9PJ98 Q9PJ98]
+
−
** [http://www.uniprot.org/uniprot/P39522 P39522]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=2,3-Dihydroxy-3-methylvalerate dehydratase}}
+
{{#set: common name=asparagine synthase (glutamine-hydrolyzing)}}
−
{{#set: common name=Dihydroxy-acid/6-phosphogluconate dehydratase}}
+
{{#set: common name=carbamoyl-phosphate synthase (glutamine-hydrolyzing)}}
−
{{#set: ec number=EC-4.2.1.9}}
+
{{#set: common name=Aldolase-type TIM barrel}}
−
{{#set: gene associated=Ec-03_000220}}
+
{{#set: common name=CTP synthase}}
−
{{#set: in pathway=PWY-5103|ILEUSYN-PWY|PWY-5101|PWY-5104}}
+
{{#set: common name=glutaminase}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: common name=Asparaginase/glutaminase}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
{{#set: common name=Asparagine synthase, glutamine-hydrolyzing}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: common name=Glutamate synthase (ferredoxin-dependent)}}
 +
{{#set: common name=GMP synthase (glutamine-hydrolyzing)}}
 +
{{#set: ec number=EC-3.5.1.38}}
 +
{{#set: ec number=EC-3.5.1.2}}
 +
{{#set: gene associated=Ec-10_006110|Ec-00_000570|Ec-00_000720|Ec-06_001280|Ec-28_000990|Ec-27_004970|Ec-11_002360|Ec-15_004750|Ec-13_002710|Ec-15_003670}}
 +
{{#set: in pathway=GLUTAMINDEG-PWY|CITRULBIO-PWY}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:26, 21 March 2018

Reaction GLUTAMIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • asparagine synthase (glutamine-hydrolyzing)
    • carbamoyl-phosphate synthase (glutamine-hydrolyzing)
    • Aldolase-type TIM barrel
    • CTP synthase
    • glutaminase
    • Asparaginase/glutaminase
    • Asparagine synthase, glutamine-hydrolyzing
    • Glutamate synthase (ferredoxin-dependent)
    • GMP synthase (glutamine-hydrolyzing)
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-glutamine[c] + 1 H2O[c] => 1 ammonium[c] + 1 L-glutamate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links









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