Difference between revisions of "Ec-02 002270"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.5-RXN 3.1.26.5-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Ribonuclease P, Rpp40...")
 
(Created page with "Category:Gene == Gene Ec-02_002270 == * left end position: ** 2450529 * transcription direction: ** NEGATIVE * right end position: ** 2463596 * centisome position: ** 37.5...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.5-RXN 3.1.26.5-RXN] ==
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== Gene Ec-02_002270 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2450529
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* common name:
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* transcription direction:
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** Ribonuclease P, Rpp40
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** NEGATIVE
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** ribonuclease P
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* right end position:
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** RNAse P, Rpr2/Rpp21 subunit
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** 2463596
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/3.1.26.5 EC-3.1.26.5]
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** 37.539944   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0356_0010
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** Esi0356_0010
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** CYSRS
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[CYSTEINE--TRNA-LIGASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[CPD0-2352]][c] '''=>''' 1 [[tRNA-fragment]][c] '''+''' 1 [[CPD0-2353]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H2O[c] '''+''' 1 a tRNA precursor with a 5' extension and a short 3' extension[c] '''=>''' 1 a tRNA fragment[c] '''+''' 1 a tRNA precursor with a short 3' extension[c]
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== Pathways associated ==
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* [[TRNA-CHARGING-PWY]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-04_004570]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-03_005340]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-01_005810]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-22_001370]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways ==
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* [[PWY0-1479]], tRNA processing: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1479 PWY0-1479]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: left end position=2450529}}
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** [http://www.uniprot.org/uniprot/Q02773 Q02773]
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.uniprot.org/uniprot/P41812 P41812]
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{{#set: right end position=2463596}}
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** [http://www.uniprot.org/uniprot/P0A5X8 P0A5X8]
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{{#set: centisome position=37.539944    }}
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** [http://www.uniprot.org/uniprot/P48206 P48206]
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{{#set: common name=Esi_0356_0010|Esi0356_0010|CYSRS}}
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** [http://www.uniprot.org/uniprot/Q9JW46 Q9JW46]
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{{#set: reaction associated=CYSTEINE--TRNA-LIGASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q9PNX5 Q9PNX5]
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
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** [http://www.uniprot.org/uniprot/Q9CJ73 Q9CJ73]
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** [http://www.uniprot.org/uniprot/P29433 P29433]
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** [http://www.uniprot.org/uniprot/P25817 P25817]
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** [http://www.uniprot.org/uniprot/P22835 P22835]
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** [http://www.uniprot.org/uniprot/P25814 P25814]
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** [http://www.uniprot.org/uniprot/P0A7Y8 P0A7Y8]
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** [http://www.uniprot.org/uniprot/Q55005 Q55005]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Ribonuclease P, Rpp40}}
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{{#set: common name=ribonuclease P}}
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{{#set: common name=RNAse P, Rpr2/Rpp21 subunit}}
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{{#set: ec number=EC-3.1.26.5}}
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{{#set: gene associated=Ec-04_004570|Ec-03_005340|Ec-01_005810|Ec-22_001370}}
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{{#set: in pathway=PWY0-1479}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:27, 21 March 2018

Gene Ec-02_002270

  • left end position:
    • 2450529
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2463596
  • centisome position:
    • 37.539944
  • Synonym(s):
    • Esi_0356_0010
    • Esi0356_0010
    • CYSRS

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-02_002270&oldid=26972"