Difference between revisions of "RXN-3142"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5743 PWY-5743] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200795 TAX-...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3142 RXN-3142] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5743 PWY-5743] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3142 RXN-3142] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200795 TAX-200795]
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** LEFT-TO-RIGHT
* common name:
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* ec number:
** 3-hydroxypropanoate cycle
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** [http://enzyme.expasy.org/EC/2.3.1.170 EC-2.3.1.170]
 
* Synonym(s):
 
* Synonym(s):
** 3-hydroxypropionate/malyl-CoA cycle
 
** 3-hydroxypropionate cycle
 
  
== Reaction(s) found ==
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== Reaction Formula ==
'''3''' reactions found over '''11''' reactions in the full pathway
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* With identifiers:
* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
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** 3 [[MALONYL-COA]][c] '''+''' 4 [[PROTON]][c] '''+''' 1 [[P-COUMAROYL-COA]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[CPD-3041]][c] '''+''' 3 [[CARBON-DIOXIDE]][c] '''+''' 1 [[WATER]][c] '''+''' 4 [[CO-A]][c] '''+''' 1 [[NADP]][c]
** 7 associated gene(s):
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* With common name(s):
*** [[Ec-19_003040]]
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** 3 malonyl-CoA[c] '''+''' 4 H+[c] '''+''' 1 4-coumaroyl-CoA[c] '''+''' 1 NADPH[c] '''=>''' 1 isoliquiritigenin[c] '''+''' 3 CO2[c] '''+''' 1 H2O[c] '''+''' 4 coenzyme A[c] '''+''' 1 NADP+[c]
*** [[Ec-03_001890]]
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*** [[Ec-14_002460]]
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== Genes associated with this reaction  ==
*** [[Ec-01_009720]]
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Genes have been associated with this reaction based on different elements listed below.
*** [[Ec-01_010970]]
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* Gene: [[Ec-03_003520]]
*** [[Ec-19_003230]]
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** Source: [[orthology-aragem]]
*** [[Ec-20_002520]]
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== Pathways  ==
** 2 reconstruction source(s) associated:
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* [[PWY1F-FLAVSYN]], flavonoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-FLAVSYN PWY1F-FLAVSYN]
*** [[annotation-esiliculosus_genome]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
*** [[orthology-aragem]]
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== Reconstruction information  ==
* [[PROPIONYL-COA-CARBOXY-RXN]]
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* Category: [[orthology]]
** 1 associated gene(s):
+
** Source: [[orthology-aragem]]
*** [[Ec-01_010970]]
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*** Tool: [[pantograph]]
** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-6383]]
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** 2 associated gene(s):
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*** [[Ec-14_006530]]
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*** [[Ec-17_000320]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=MALYL-COA-LYASE-RXN MALYL-COA-LYASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-EPIM-RXN METHYLMALONYL-COA-EPIM-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-MUT-RXN METHYLMALONYL-COA-MUT-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8963 RXN-8963]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8964 RXN-8964]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8974 RXN-8974]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9086 RXN-9086]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9087 RXN-9087]
+
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-200795}}
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* RHEA:
{{#set: common name=3-hydroxypropanoate cycle}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10584 10584]
{{#set: common name=3-hydroxypropionate/malyl-CoA cycle|3-hydroxypropionate cycle}}
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* LIGAND-RXN:
{{#set: reaction found=3}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06568 R06568]
{{#set: total reaction=11}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07254 R07254]
{{#set: completion rate=27.0}}
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{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-2.3.1.170}}
 +
{{#set: gene associated=Ec-03_003520}}
 +
{{#set: in pathway=PWY1F-FLAVSYN}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:27, 21 March 2018

Reaction RXN-3142

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links