Difference between revisions of "DNA-containing-abasic-Sites"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3142 RXN-3142] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DNA-containing-abasic-Sites DNA-containing-abasic-Sites] == * common name: ** a DNA containing...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3142 RXN-3142] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DNA-containing-abasic-Sites DNA-containing-abasic-Sites] ==
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* direction:
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* common name:
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** LEFT-TO-RIGHT
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** a DNA containing an apurinic/apyrimidinic site
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.170 EC-2.3.1.170]
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* Synonym(s):
 
* Synonym(s):
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** an AP (apurinic or apyrimidinic) site
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** a DNA containing an abasic site
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** a DNA containing an AP site
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[4.2.99.18-RXN]]
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** 1 [[P-COUMAROYL-COA]][c] '''+''' 3 [[MALONYL-COA]][c] '''+''' 1 [[NADPH]][c] '''+''' 4 [[PROTON]][c] '''=>''' 4 [[CO-A]][c] '''+''' 3 [[CARBON-DIOXIDE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[CPD-3041]][c] '''+''' 1 [[NADP]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 4-coumaroyl-CoA[c] '''+''' 3 malonyl-CoA[c] '''+''' 1 NADPH[c] '''+''' 4 H+[c] '''=>''' 4 coenzyme A[c] '''+''' 3 CO2[c] '''+''' 1 H2O[c] '''+''' 1 isoliquiritigenin[c] '''+''' 1 NADP+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-03_003520]]
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY1F-FLAVSYN]], flavonoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-FLAVSYN PWY1F-FLAVSYN]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: common name=a DNA containing an apurinic/apyrimidinic site}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10584 10584]
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{{#set: common name=an AP (apurinic or apyrimidinic) site|a DNA containing an abasic site|a DNA containing an AP site}}
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* LIGAND-RXN:
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{{#set: consumed by=4.2.99.18-RXN}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06568 R06568]
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** [http://www.genome.jp/dbget-bin/www_bget?R07254 R07254]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-2.3.1.170}}
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{{#set: gene associated=Ec-03_003520}}
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{{#set: in pathway=PWY1F-FLAVSYN}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:27, 21 March 2018

Metabolite DNA-containing-abasic-Sites

  • common name:
    • a DNA containing an apurinic/apyrimidinic site
  • Synonym(s):
    • an AP (apurinic or apyrimidinic) site
    • a DNA containing an abasic site
    • a DNA containing an AP site

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=DNA-containing-abasic-Sites&oldid=27020"